Top 10 genes with highest correlation to Rv1935c/echA13:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0366c/- | (cc=0.542) | info on Rv0366c/- |
| Rv2629/- | (cc=0.5372) | info on Rv2629/- |
| Rv1104/- | (cc=0.5292) | info on Rv1104/- |
| Rv1279/- | (cc=0.5151) | info on Rv1279/- |
| Rv3136A/- | (cc=0.5099) | info on Rv3136A/- |
| Rv2972c/- | (cc=0.5006) | info on Rv2972c/- |
| Rv1171/- | (cc=0.4784) | info on Rv1171/- |
| Rv3060c/- | (cc=0.4762) | info on Rv3060c/- |
| Rv2573/- | (cc=0.4699) | info on Rv2573/- |
| Rv0959/- | (cc=0.4624) | info on Rv0959/- |
Correlation of Rv1935c/echA13 with Rv3060c/-
Normalized LFCs for Rv1935c/echA13:
(description and provenance of datasets)
| Rv1935c/echA13 | Rv3060c/- | |
| Fe_supp_jason_reseq | 0.286 | -0.284 |
| low_pH_jason_reseq | -0.44 | -0.56 |
| NO_jason_reseq | 0.1 | -0.21 |
| B6_jason_reseq | 1.142 | -0.168 |
| MHCII_jason_reseq | 0.481 | 0.013 |
| Isoniazid02 | 0.509 | -0.314 |
| Rifampicin4 | 0.753 | -0.393 |
| Ethambutol3 | 0.544 | 2.165 |
| Meropenem3 | 2.164 | 0.212 |
| Vancomycin16 | 0.708 | -0.17 |
| Rv2680_day32 | 0.694 | -0.044 |
| H37Rv_KO_MarP | 0.625 | 0.813 |
| hypoxia_3wks | 0.128 | -0.431 |
| hypoxia_6wks | 0.121 | -0.643 |
| glycerol | -2.017 | -1.012 |
| cholesterol | -0.744 | -0.686 |
| AJ | -0.069 | -0.04 |
| Bibs02 | -0.617 | -0.632 |
| Bibs02c | -0.347 | 0.036 |
| BL6 | -0.672 | -1.318 |
| BL6a | -0.496 | -0.75 |
| BXD01 | -0.571 | -0.981 |
| BXD010 | -0.472 | -1.011 |
| BXD011 | -0.537 | -0.872 |
| BXD03 | -0.727 | -0.581 |
| BXD04 | -0.783 | -1.323 |
| BXD05 | -0.056 | -0.371 |
| BXD06 | -0.71 | -0.814 |
| BXD07 | -0.213 | -0.964 |
| BXD08 | -0.62 | -0.63 |
| BXD09 | -0.063 | -1.128 |
| CAST | 0.21 | -0.327 |
| CCcont | -0.803 | -0.957 |
| DS01 | -0.648 | -0.53 |
| DS02 | -0.495 | -0.972 |
| DS04 | 0.177 | -0.655 |
| DS0c | -0.242 | -0.647 |
| GP01 | -0.131 | -1.267 |
| GP02 | 1.044 | 0.01 |
| GP0c | -0.556 | -1.594 |
| NOD | -0.353 | -0.688 |
| NZO | 0.581 | 0.208 |
| PWK | -0.838 | -0.331 |
| H37Rv_KO_CtpC | -2.121 | -0.106 |
| H37Rv_KO_CtpD | -0.688 | 0.222 |
| H37Rv_KO_Rv1272 | -1.737 | -1.167 |
| H37Rv_KO_SugABC | 0.188 | -0.678 |
| H37Rv_KO_MbtN | -2.394 | -0.978 |
| Trans05 | -0.434 | -0.441 |
| macrophage_unactivated | -0.369 | -0.893 |
| IL1 | 0.389 | -1.112 |
| Rapamycin | 0.454 | -0.393 |
| Tcell | -0.143 | -0.505 |
| GMCSF | 1.587 | 0.063 |
| IFNab | -0.115 | -0.508 |
| IFNg | -0.016 | -0.27 |
| IFNg_GMCSF1 | 0.515 | -0.487 |
| Rv1432_day32 | 0.42 | 0.098 |
| Rv1565c_day32 | -1.385 | -0.586 |
| secA2_input | -0.704 | -0.554 |
| delta_Rv3594 | -0.297 | 0.064 |
| delta_Rv3717 | 0.188 | 0.22 |
| delta_Rv3811 | -0.178 | -0.32 |
| delta_Rv0954 | -0.19 | 0.176 |
| PonA1 | 0.197 | 0.484 |
| EccD1_KO | 0.924 | 0.414 |
| EspI_KO | 0.194 | 0.388 |
| PE35_KO | 0.624 | 0.461 |
| PPE68_KO | 0.278 | -0.397 |
| glycerol2 | -1.003 | 0.353 |
| lignocerate | -0.632 | -0.371 |
| oleate | -0.313 | -0.398 |
| phosphatidylcholine | -0.374 | 0.183 |
| acetate | -0.989 | -0.785 |
| glucAc | -0.276 | -0.589 |
| Rv0950ko | 0.16 | 0.0 |
| Rv1096ko | 0.314 | -0.371 |
| Rv3684ko | 0.373 | -0.675 |
| delta_otsA_trehalose | 1.177 | 0.494 |