Top 10 genes with highest correlation to Rv1930c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3538/- | (cc=0.5542) | info on Rv3538/- |
| Rv2426c/- | (cc=0.533) | info on Rv2426c/- |
| Rv1731/gabD2 | (cc=0.5085) | info on Rv1731/gabD2 |
| Rv0396/- | (cc=0.4927) | info on Rv0396/- |
| Rv1070c/echA8 | (cc=0.4919) | info on Rv1070c/echA8 |
| Rv0034/- | (cc=0.4878) | info on Rv0034/- |
| Rv2657c/- | (cc=0.4796) | info on Rv2657c/- |
| Rv2532c/- | (cc=0.479) | info on Rv2532c/- |
| Rv0084/hycD | (cc=0.477) | info on Rv0084/hycD |
| Rv0609/vapC28 | (cc=0.4624) | info on Rv0609/vapC28 |
Correlation of Rv1930c/- with Rv3538/-
Normalized LFCs for Rv1930c/-:
(description and provenance of datasets)
| Rv1930c/- | Rv3538/- | |
| Fe_supp_jason_reseq | 1.888 | -0.199 |
| low_pH_jason_reseq | -0.828 | 1.64 |
| NO_jason_reseq | 0.0 | -1.864 |
| B6_jason_reseq | -1.811 | 1.087 |
| MHCII_jason_reseq | -0.303 | -0.08 |
| Isoniazid02 | 0.745 | -0.371 |
| Rifampicin4 | -1.625 | -1.378 |
| Ethambutol3 | 1.952 | 3.351 |
| Meropenem3 | -0.559 | -0.305 |
| Vancomycin16 | 0.0 | -0.931 |
| Rv2680_day32 | -0.459 | -0.376 |
| H37Rv_KO_MarP | -0.569 | 0.062 |
| hypoxia_3wks | 0.459 | -1.208 |
| hypoxia_6wks | 1.384 | -0.255 |
| glycerol | -1.181 | 0.592 |
| cholesterol | 0.17 | -2.077 |
| AJ | 0.424 | -0.533 |
| Bibs02 | -2.56 | -0.67 |
| Bibs02c | 1.325 | -0.518 |
| BL6 | -1.436 | -0.686 |
| BL6a | 0.442 | -0.768 |
| BXD01 | -0.944 | -1.266 |
| BXD010 | 0.234 | -1.397 |
| BXD011 | -0.745 | -1.444 |
| BXD03 | -0.523 | -2.02 |
| BXD04 | -1.33 | -1.402 |
| BXD05 | -1.885 | -2.501 |
| BXD06 | -0.669 | -2.601 |
| BXD07 | -1.49 | -1.834 |
| BXD08 | -1.63 | -1.761 |
| BXD09 | -0.226 | -2.099 |
| CAST | -0.305 | -1.919 |
| CCcont | -0.24 | 1.178 |
| DS01 | 0.881 | -1.071 |
| DS02 | 0.441 | -0.345 |
| DS04 | 1.148 | -1.493 |
| DS0c | -2.187 | -1.54 |
| GP01 | -1.383 | -1.416 |
| GP02 | -1.165 | -1.705 |
| GP0c | -1.95 | -1.314 |
| NOD | 0.361 | 2.21 |
| NZO | 1.87 | 0.223 |
| PWK | 1.017 | -1.228 |
| H37Rv_KO_CtpC | -0.261 | -1.705 |
| H37Rv_KO_CtpD | -1.197 | -1.551 |
| H37Rv_KO_Rv1272 | 0.71 | -0.487 |
| H37Rv_KO_SugABC | -0.999 | -1.93 |
| H37Rv_KO_MbtN | -0.293 | -0.515 |
| Trans05 | -1.318 | -0.818 |
| macrophage_unactivated | -0.789 | -2.607 |
| IL1 | -1.231 | -3.307 |
| Rapamycin | 0.74 | -2.338 |
| Tcell | -2.659 | -3.904 |
| GMCSF | 0.919 | -0.098 |
| IFNab | 0.0 | -1.445 |
| IFNg | -0.369 | -1.871 |
| IFNg_GMCSF1 | -2.049 | -3.764 |
| Rv1432_day32 | 0.0 | -2.48 |
| Rv1565c_day32 | 0.0 | -0.982 |
| secA2_input | 0.504 | 1.199 |
| delta_Rv3594 | 1.617 | 0.788 |
| delta_Rv3717 | 1.869 | 0.875 |
| delta_Rv3811 | 0.461 | 0.617 |
| delta_Rv0954 | 0.211 | 0.398 |
| PonA1 | 1.667 | 0.355 |
| EccD1_KO | 2.009 | 0.635 |
| EspI_KO | 0.827 | 0.445 |
| PE35_KO | 2.797 | -1.091 |
| PPE68_KO | 1.517 | -0.71 |
| glycerol2 | 0.865 | 1.822 |
| lignocerate | 1.438 | 2.468 |
| oleate | -0.142 | -0.537 |
| phosphatidylcholine | 0.581 | 1.882 |
| acetate | 3.285 | 2.509 |
| glucAc | 1.5 | 1.713 |
| Rv0950ko | 0.793 | 1.384 |
| Rv1096ko | 2.153 | 1.882 |
| Rv3684ko | 0.701 | 1.916 |
| delta_otsA_trehalose | -0.331 | 1.01 |