Top 10 genes with highest correlation to Rv1908c/katG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2259/mscR | (cc=0.6783) | info on Rv2259/mscR |
| Rv3715c/recR | (cc=0.6779) | info on Rv3715c/recR |
| Rv1420/uvrC | (cc=0.6662) | info on Rv1420/uvrC |
| Rv1633/uvrB | (cc=0.663) | info on Rv1633/uvrB |
| Rv1173/fbiC | (cc=0.628) | info on Rv1173/fbiC |
| Rv1701/- | (cc=0.618) | info on Rv1701/- |
| Rv2198c/mmpS3 | (cc=0.6134) | info on Rv2198c/mmpS3 |
| Rv1638/uvrA | (cc=0.6103) | info on Rv1638/uvrA |
| Rv2373c/dnaJ2 | (cc=0.5982) | info on Rv2373c/dnaJ2 |
| Rv3624c/hpt | (cc=0.5969) | info on Rv3624c/hpt |
Correlation of Rv1908c/katG with Rv1701/-
Normalized LFCs for Rv1908c/katG:
(description and provenance of datasets)
| Rv1908c/katG | Rv1701/- | |
| Fe_supp_jason_reseq | 2.303 | 0.538 |
| low_pH_jason_reseq | -0.44 | -0.345 |
| NO_jason_reseq | -0.69 | 0.0 |
| B6_jason_reseq | -0.292 | -0.649 |
| MHCII_jason_reseq | -0.257 | -0.315 |
| Isoniazid02 | 0.0 | 0.63 |
| Rifampicin4 | 0.0 | -1.995 |
| Ethambutol3 | 0.0 | -1.048 |
| Meropenem3 | 0.0 | -0.744 |
| Vancomycin16 | 0.0 | -0.512 |
| Rv2680_day32 | 0.0 | -0.459 |
| H37Rv_KO_MarP | -1.722 | -1.205 |
| hypoxia_3wks | -0.977 | -0.722 |
| hypoxia_6wks | -2.714 | -0.808 |
| glycerol | 0.0 | 2.741 |
| cholesterol | 0.0 | 2.486 |
| AJ | 0.0 | -0.442 |
| Bibs02 | 0.0 | -0.167 |
| Bibs02c | 0.0 | -0.399 |
| BL6 | 0.238 | -0.114 |
| BL6a | 0.544 | -0.181 |
| BXD01 | 0.248 | -0.248 |
| BXD010 | 0.0 | -0.244 |
| BXD011 | 0.854 | 0.0 |
| BXD03 | 0.0 | 0.113 |
| BXD04 | 0.34 | -0.236 |
| BXD05 | 0.661 | 0.0 |
| BXD06 | 0.469 | -0.254 |
| BXD07 | 0.0 | 0.0 |
| BXD08 | 0.365 | -0.253 |
| BXD09 | 0.69 | -0.268 |
| CAST | 0.0 | -0.439 |
| CCcont | 3.165 | 2.164 |
| DS01 | 0.0 | -0.45 |
| DS02 | 0.0 | 0.0 |
| DS04 | 0.953 | 0.0 |
| DS0c | 0.0 | -0.413 |
| GP01 | 0.0 | -0.188 |
| GP02 | 0.0 | -0.159 |
| GP0c | 0.0 | 0.303 |
| NOD | 0.0 | -0.205 |
| NZO | 0.0 | -0.38 |
| PWK | 0.0 | -0.374 |
| H37Rv_KO_CtpC | 0.446 | -0.148 |
| H37Rv_KO_CtpD | 0.703 | 0.295 |
| H37Rv_KO_Rv1272 | 0.141 | -0.129 |
| H37Rv_KO_SugABC | 0.42 | 0.0 |
| H37Rv_KO_MbtN | 2.414 | 0.0 |
| Trans05 | 0.359 | -0.119 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | -0.374 |
| Rapamycin | 0.0 | -0.387 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.417 | 0.0 |
| IFNg | 0.0 | 0.307 |
| IFNg_GMCSF1 | 0.0 | -0.396 |
| Rv1432_day32 | -0.494 | 0.0 |
| Rv1565c_day32 | 0.0 | -1.339 |
| secA2_input | 0.67 | -0.423 |
| delta_Rv3594 | 0.907 | 0.281 |
| delta_Rv3717 | 0.784 | -0.415 |
| delta_Rv3811 | 0.812 | -0.553 |
| delta_Rv0954 | 0.842 | 0.163 |
| PonA1 | -0.419 | -0.753 |
| EccD1_KO | -4.969 | -2.529 |
| EspI_KO | -4.743 | -1.76 |
| PE35_KO | 1.374 | -0.805 |
| PPE68_KO | 0.275 | -1.133 |
| glycerol2 | -3.698 | -1.712 |
| lignocerate | -2.548 | -1.348 |
| oleate | -3.077 | -1.911 |
| phosphatidylcholine | -3.546 | -1.711 |
| acetate | 0.253 | -0.178 |
| glucAc | -0.375 | 0.375 |
| Rv0950ko | -1.212 | -0.814 |
| Rv1096ko | -1.493 | -0.446 |
| Rv3684ko | -0.298 | -1.32 |
| delta_otsA_trehalose | 0.153 | -0.311 |