Top 10 genes with highest correlation to Rv1873/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2464c/- | (cc=0.5248) | info on Rv2464c/- |
| Rv1755c/plcD | (cc=0.5083) | info on Rv1755c/plcD |
| Rv2351c/plcA | (cc=0.4941) | info on Rv2351c/plcA |
| Rv2713/sthA | (cc=0.457) | info on Rv2713/sthA |
| Rv2025c/- | (cc=0.4534) | info on Rv2025c/- |
| Rv3395A/- | (cc=0.4477) | info on Rv3395A/- |
| Rv3018c/PPE46 | (cc=0.4448) | info on Rv3018c/PPE46 |
| Rv3366/spoU | (cc=0.441) | info on Rv3366/spoU |
| Rv1934c/fadE17 | (cc=0.4407) | info on Rv1934c/fadE17 |
| Rv1871c/- | (cc=0.4405) | info on Rv1871c/- |
Correlation of Rv1873/- with Rv2464c/-
Normalized LFCs for Rv1873/-:
(description and provenance of datasets)
| Rv1873/- | Rv2464c/- | |
| Fe_supp_jason_reseq | -0.407 | -0.502 |
| low_pH_jason_reseq | -0.616 | -0.718 |
| NO_jason_reseq | 0.352 | 0.155 |
| B6_jason_reseq | 0.022 | -0.827 |
| MHCII_jason_reseq | 0.371 | -0.638 |
| Isoniazid02 | 0.389 | 0.844 |
| Rifampicin4 | 0.344 | 0.612 |
| Ethambutol3 | 0.939 | 0.801 |
| Meropenem3 | 0.656 | 0.545 |
| Vancomycin16 | 0.297 | 0.801 |
| Rv2680_day32 | -0.217 | 0.444 |
| H37Rv_KO_MarP | -0.137 | -0.243 |
| hypoxia_3wks | 0.379 | 0.152 |
| hypoxia_6wks | -0.035 | 0.23 |
| glycerol | -0.418 | 0.372 |
| cholesterol | -0.205 | -0.11 |
| AJ | -0.366 | -0.119 |
| Bibs02 | 0.326 | 0.225 |
| Bibs02c | -0.609 | -1.005 |
| BL6 | -0.571 | -0.698 |
| BL6a | -0.179 | -0.484 |
| BXD01 | -0.157 | 0.172 |
| BXD010 | 0.306 | 0.448 |
| BXD011 | -0.084 | 0.179 |
| BXD03 | -0.386 | -0.594 |
| BXD04 | -0.12 | 0.451 |
| BXD05 | 0.175 | -0.256 |
| BXD06 | -0.223 | -0.309 |
| BXD07 | -0.1 | -0.156 |
| BXD08 | -0.5 | 0.427 |
| BXD09 | -0.216 | -0.268 |
| CAST | 0.028 | -0.534 |
| CCcont | -0.79 | -0.34 |
| DS01 | -0.115 | -0.113 |
| DS02 | -0.063 | 0.287 |
| DS04 | 0.083 | 0.357 |
| DS0c | -0.423 | -0.222 |
| GP01 | 1.009 | 1.109 |
| GP02 | 0.38 | 1.169 |
| GP0c | 0.506 | 0.97 |
| NOD | 0.48 | 0.322 |
| NZO | -0.48 | 0.221 |
| PWK | -0.182 | 0.367 |
| H37Rv_KO_CtpC | 0.494 | 0.63 |
| H37Rv_KO_CtpD | -0.666 | 0.464 |
| H37Rv_KO_Rv1272 | -0.226 | -0.197 |
| H37Rv_KO_SugABC | 0.452 | 0.242 |
| H37Rv_KO_MbtN | 1.121 | -0.068 |
| Trans05 | -0.222 | 0.276 |
| macrophage_unactivated | -0.035 | -0.363 |
| IL1 | -1.103 | -0.967 |
| Rapamycin | -0.11 | -0.451 |
| Tcell | -0.541 | -0.375 |
| GMCSF | 0.359 | -0.422 |
| IFNab | -0.453 | -0.665 |
| IFNg | -0.486 | -0.572 |
| IFNg_GMCSF1 | -0.349 | -0.691 |
| Rv1432_day32 | -0.008 | -0.047 |
| Rv1565c_day32 | 0.0 | 0.891 |
| secA2_input | -0.269 | 0.859 |
| delta_Rv3594 | -0.459 | 0.457 |
| delta_Rv3717 | -0.535 | 0.451 |
| delta_Rv3811 | -0.348 | -0.129 |
| delta_Rv0954 | -0.518 | 0.513 |
| PonA1 | -0.381 | 0.179 |
| EccD1_KO | 0.306 | 0.141 |
| EspI_KO | 0.011 | 0.188 |
| PE35_KO | -0.327 | -0.015 |
| PPE68_KO | -0.333 | -0.205 |
| glycerol2 | 0.607 | 0.893 |
| lignocerate | 0.593 | 0.717 |
| oleate | 0.964 | 1.143 |
| phosphatidylcholine | 0.873 | 1.158 |
| acetate | -0.08 | 0.206 |
| glucAc | 0.005 | 0.074 |
| Rv0950ko | 0.422 | -0.106 |
| Rv1096ko | 0.47 | -0.709 |
| Rv3684ko | -0.056 | -0.278 |
| delta_otsA_trehalose | -0.168 | -0.413 |