Top 10 genes with highest correlation to Rv1871c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2722/- | (cc=0.6053) | info on Rv2722/- |
| Rv1920/- | (cc=0.5532) | info on Rv1920/- |
| Rv1816/- | (cc=0.5521) | info on Rv1816/- |
| Rv1949c/- | (cc=0.5509) | info on Rv1949c/- |
| Rv1582c/- | (cc=0.5457) | info on Rv1582c/- |
| Rv1978/- | (cc=0.5423) | info on Rv1978/- |
| Rv1787/PPE25 | (cc=0.5409) | info on Rv1787/PPE25 |
| Rv1521/fadD25 | (cc=0.5377) | info on Rv1521/fadD25 |
| Rv2510c/- | (cc=0.534) | info on Rv2510c/- |
| Rv1548c/PPE21 | (cc=0.5304) | info on Rv1548c/PPE21 |
Correlation of Rv1871c/- with Rv2510c/-
Normalized LFCs for Rv1871c/-:
(description and provenance of datasets)
| Rv1871c/- | Rv2510c/- | |
| Fe_supp_jason_reseq | -0.912 | -0.36 |
| low_pH_jason_reseq | -0.53 | -0.574 |
| NO_jason_reseq | 0.473 | -0.095 |
| B6_jason_reseq | -1.258 | -0.465 |
| MHCII_jason_reseq | -1.425 | -0.321 |
| Isoniazid02 | 1.439 | 0.736 |
| Rifampicin4 | 0.479 | -0.677 |
| Ethambutol3 | 0.428 | -0.102 |
| Meropenem3 | 0.461 | 0.255 |
| Vancomycin16 | 0.456 | -0.133 |
| Rv2680_day32 | -0.682 | 1.553 |
| H37Rv_KO_MarP | -0.285 | -0.477 |
| hypoxia_3wks | 0.75 | 0.399 |
| hypoxia_6wks | 0.073 | 0.43 |
| glycerol | -0.992 | -0.162 |
| cholesterol | -0.324 | -0.057 |
| AJ | -0.239 | -0.218 |
| Bibs02 | -0.36 | 0.514 |
| Bibs02c | -1.199 | -0.806 |
| BL6 | -0.055 | 0.706 |
| BL6a | -0.277 | 0.653 |
| BXD01 | -0.095 | 0.287 |
| BXD010 | 0.395 | 1.203 |
| BXD011 | 0.603 | 0.588 |
| BXD03 | -0.029 | 0.722 |
| BXD04 | -0.269 | 0.285 |
| BXD05 | 0.71 | 1.522 |
| BXD06 | 0.057 | 0.774 |
| BXD07 | 0.007 | 0.771 |
| BXD08 | 0.157 | 0.955 |
| BXD09 | -0.145 | 0.783 |
| CAST | 0.37 | 0.359 |
| CCcont | -0.471 | 0.056 |
| DS01 | -0.039 | -0.395 |
| DS02 | -0.501 | 0.11 |
| DS04 | -0.177 | 0.746 |
| DS0c | -0.277 | 0.028 |
| GP01 | 1.05 | 0.669 |
| GP02 | 0.11 | -0.781 |
| GP0c | 0.703 | 0.416 |
| NOD | 0.485 | 0.423 |
| NZO | -0.688 | 0.288 |
| PWK | -0.604 | -0.104 |
| H37Rv_KO_CtpC | 0.112 | 0.75 |
| H37Rv_KO_CtpD | 0.495 | -0.312 |
| H37Rv_KO_Rv1272 | 0.893 | 0.579 |
| H37Rv_KO_SugABC | 0.349 | 0.73 |
| H37Rv_KO_MbtN | 1.584 | 0.785 |
| Trans05 | 0.698 | 1.083 |
| macrophage_unactivated | 0.625 | 0.107 |
| IL1 | -0.403 | 0.658 |
| Rapamycin | 0.476 | 0.681 |
| Tcell | -0.345 | 0.147 |
| GMCSF | 0.869 | 0.428 |
| IFNab | 0.686 | 0.583 |
| IFNg | -0.168 | 0.724 |
| IFNg_GMCSF1 | 0.292 | 0.669 |
| Rv1432_day32 | -0.485 | 0.0 |
| Rv1565c_day32 | -0.009 | 0.281 |
| secA2_input | -0.994 | 0.441 |
| delta_Rv3594 | -1.137 | -1.097 |
| delta_Rv3717 | -1.158 | -1.004 |
| delta_Rv3811 | -0.758 | -0.055 |
| delta_Rv0954 | -0.908 | -1.87 |
| PonA1 | -1.138 | -1.709 |
| EccD1_KO | -0.306 | -0.441 |
| EspI_KO | 0.915 | 0.046 |
| PE35_KO | -0.184 | -0.143 |
| PPE68_KO | -0.074 | 0.346 |
| glycerol2 | 0.265 | -0.272 |
| lignocerate | -0.578 | -0.458 |
| oleate | 0.698 | 0.118 |
| phosphatidylcholine | 0.37 | 0.073 |
| acetate | -0.836 | -0.672 |
| glucAc | -1.325 | -0.818 |
| Rv0950ko | -0.874 | -0.042 |
| Rv1096ko | -1.378 | -0.546 |
| Rv3684ko | -0.707 | -0.593 |
| delta_otsA_trehalose | 0.11 | 1.892 |