Top 10 genes with highest correlation to Rv1838c/vapC13:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1527c/pks5 | (cc=0.5927) | info on Rv1527c/pks5 |
| Rv1834/lipZ | (cc=0.5892) | info on Rv1834/lipZ |
| Rv3196/- | (cc=0.582) | info on Rv3196/- |
| Rv3056/dinP | (cc=0.5482) | info on Rv3056/dinP |
| Rv3096/- | (cc=0.5437) | info on Rv3096/- |
| Rv1999c/- | (cc=0.5268) | info on Rv1999c/- |
| Rv2008c/- | (cc=0.5251) | info on Rv2008c/- |
| Rv1057/- | (cc=0.5168) | info on Rv1057/- |
| Rv3354/- | (cc=0.5156) | info on Rv3354/- |
| Rv3059/cyp136 | (cc=0.5127) | info on Rv3059/cyp136 |
Correlation of Rv1838c/vapC13 with Rv1057/-
Normalized LFCs for Rv1838c/vapC13:
(description and provenance of datasets)
| Rv1838c/vapC13 | Rv1057/- | |
| Fe_supp_jason_reseq | 0.268 | -0.014 |
| low_pH_jason_reseq | -1.65 | 0.186 |
| NO_jason_reseq | -0.465 | 0.423 |
| B6_jason_reseq | -0.765 | 0.318 |
| MHCII_jason_reseq | 0.325 | 0.133 |
| Isoniazid02 | -0.079 | 0.026 |
| Rifampicin4 | -0.26 | -0.777 |
| Ethambutol3 | 0.559 | 1.098 |
| Meropenem3 | 0.066 | -0.067 |
| Vancomycin16 | -1.321 | -0.424 |
| Rv2680_day32 | -0.59 | -1.83 |
| H37Rv_KO_MarP | -0.045 | 0.752 |
| hypoxia_3wks | -0.387 | -0.941 |
| hypoxia_6wks | -0.04 | -0.382 |
| glycerol | 0.554 | 0.161 |
| cholesterol | 0.531 | 0.434 |
| AJ | 0.664 | -0.049 |
| Bibs02 | 0.465 | 0.419 |
| Bibs02c | -0.367 | -0.062 |
| BL6 | -1.175 | -0.023 |
| BL6a | -0.568 | -0.281 |
| BXD01 | -1.176 | -0.522 |
| BXD010 | -1.085 | -0.647 |
| BXD011 | -0.65 | -0.057 |
| BXD03 | -0.666 | -0.429 |
| BXD04 | -0.932 | -0.154 |
| BXD05 | -0.602 | -0.879 |
| BXD06 | -0.958 | -0.575 |
| BXD07 | -0.208 | -0.423 |
| BXD08 | -0.989 | -0.162 |
| BXD09 | -0.639 | -0.43 |
| CAST | -0.482 | 0.287 |
| CCcont | -0.563 | -0.427 |
| DS01 | 0.929 | 0.027 |
| DS02 | 0.63 | 0.038 |
| DS04 | 0.696 | -0.006 |
| DS0c | 0.165 | 0.167 |
| GP01 | 1.255 | 0.624 |
| GP02 | -0.457 | 0.614 |
| GP0c | -0.014 | -0.275 |
| NOD | 0.22 | 0.129 |
| NZO | 0.363 | -0.121 |
| PWK | 0.172 | -0.053 |
| H37Rv_KO_CtpC | 0.191 | -0.51 |
| H37Rv_KO_CtpD | 0.384 | 0.223 |
| H37Rv_KO_Rv1272 | -0.108 | -0.795 |
| H37Rv_KO_SugABC | -0.078 | -0.825 |
| H37Rv_KO_MbtN | -0.421 | -0.332 |
| Trans05 | -0.038 | -0.736 |
| macrophage_unactivated | -0.956 | 0.35 |
| IL1 | 0.264 | 0.062 |
| Rapamycin | 0.399 | 0.488 |
| Tcell | -0.824 | -0.485 |
| GMCSF | 0.143 | 0.356 |
| IFNab | -0.998 | -0.33 |
| IFNg | 0.839 | -0.086 |
| IFNg_GMCSF1 | -0.094 | 0.066 |
| Rv1432_day32 | 0.213 | 0.521 |
| Rv1565c_day32 | 0.39 | 0.118 |
| secA2_input | 0.25 | 0.41 |
| delta_Rv3594 | 0.508 | -0.109 |
| delta_Rv3717 | -0.244 | -0.31 |
| delta_Rv3811 | -0.201 | -0.644 |
| delta_Rv0954 | 0.229 | 0.271 |
| PonA1 | 0.473 | 0.105 |
| EccD1_KO | 0.829 | 0.585 |
| EspI_KO | 1.092 | 0.838 |
| PE35_KO | 0.064 | 0.163 |
| PPE68_KO | 0.765 | 0.336 |
| glycerol2 | 1.007 | 0.645 |
| lignocerate | 1.325 | 1.097 |
| oleate | -0.196 | -0.265 |
| phosphatidylcholine | 1.109 | 0.873 |
| acetate | 0.449 | 0.397 |
| glucAc | 0.59 | 0.369 |
| Rv0950ko | 0.458 | -0.045 |
| Rv1096ko | 0.145 | 0.0 |
| Rv3684ko | 0.282 | 0.295 |
| delta_otsA_trehalose | -0.033 | 1.013 |