Top 10 genes with highest correlation to Rv1815/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1843c/guaB1 | (cc=0.6044) | info on Rv1843c/guaB1 |
| Rv0840c/pip | (cc=0.593) | info on Rv0840c/pip |
| Rv0846c/- | (cc=0.5732) | info on Rv0846c/- |
| Rv1182/papA3 | (cc=0.57) | info on Rv1182/papA3 |
| Rv3607c/folB | (cc=0.5547) | info on Rv3607c/folB |
| Rv1864c/- | (cc=0.554) | info on Rv1864c/- |
| Rv2063A/mazF7 | (cc=0.5496) | info on Rv2063A/mazF7 |
| Rv2340c/PE_PGRS39 | (cc=0.5444) | info on Rv2340c/PE_PGRS39 |
| Rv3401/- | (cc=0.5408) | info on Rv3401/- |
| Rv1181/pks4 | (cc=0.5366) | info on Rv1181/pks4 |
Correlation of Rv1815/- with Rv2340c/PE_PGRS39
Normalized LFCs for Rv1815/-:
(description and provenance of datasets)
| Rv1815/- | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | 1.187 | -0.063 |
| low_pH_jason_reseq | -0.681 | -0.452 |
| NO_jason_reseq | -0.895 | -0.417 |
| B6_jason_reseq | 0.908 | 0.657 |
| MHCII_jason_reseq | 2.027 | 0.619 |
| Isoniazid02 | 0.473 | 1.157 |
| Rifampicin4 | -0.885 | 0.485 |
| Ethambutol3 | 0.722 | 1.549 |
| Meropenem3 | -0.37 | 0.728 |
| Vancomycin16 | -1.114 | 0.061 |
| Rv2680_day32 | -0.86 | -0.465 |
| H37Rv_KO_MarP | 0.382 | -0.302 |
| hypoxia_3wks | -0.77 | -0.774 |
| hypoxia_6wks | -0.025 | -0.666 |
| glycerol | -0.632 | 0.65 |
| cholesterol | -0.294 | 0.315 |
| AJ | 0.37 | 0.565 |
| Bibs02 | 1.209 | 0.984 |
| Bibs02c | 1.228 | 0.679 |
| BL6 | -0.351 | -0.16 |
| BL6a | 0.495 | 0.014 |
| BXD01 | -1.049 | -0.58 |
| BXD010 | -1.936 | -0.687 |
| BXD011 | -1.246 | -0.737 |
| BXD03 | -0.695 | -0.566 |
| BXD04 | -1.959 | 0.035 |
| BXD05 | -1.901 | -0.068 |
| BXD06 | -1.292 | -0.939 |
| BXD07 | -1.714 | -0.624 |
| BXD08 | -0.991 | -0.277 |
| BXD09 | -1.12 | -0.626 |
| CAST | -1.183 | 0.794 |
| CCcont | -1.051 | -0.278 |
| DS01 | 0.546 | 0.956 |
| DS02 | -0.43 | 0.993 |
| DS04 | 0.063 | 0.45 |
| DS0c | 1.105 | 0.94 |
| GP01 | -0.849 | -0.24 |
| GP02 | -0.685 | 0.643 |
| GP0c | -0.739 | -0.111 |
| NOD | 0.482 | -0.218 |
| NZO | -0.243 | 0.48 |
| PWK | -0.065 | 0.672 |
| H37Rv_KO_CtpC | -1.624 | -0.891 |
| H37Rv_KO_CtpD | 0.743 | -0.009 |
| H37Rv_KO_Rv1272 | -0.433 | 0.232 |
| H37Rv_KO_SugABC | 0.02 | 0.386 |
| H37Rv_KO_MbtN | -0.848 | 0.239 |
| Trans05 | 0.409 | 0.28 |
| macrophage_unactivated | -2.778 | -1.004 |
| IL1 | -0.97 | -0.736 |
| Rapamycin | -1.7 | -0.62 |
| Tcell | -2.623 | -0.978 |
| GMCSF | -0.76 | -0.747 |
| IFNab | -2.113 | -0.429 |
| IFNg | -0.444 | -0.526 |
| IFNg_GMCSF1 | -0.672 | -0.154 |
| Rv1432_day32 | -0.289 | 0.352 |
| Rv1565c_day32 | 1.071 | 0.051 |
| secA2_input | -0.305 | 0.512 |
| delta_Rv3594 | -0.092 | -0.207 |
| delta_Rv3717 | 0.584 | -0.44 |
| delta_Rv3811 | 0.22 | -0.007 |
| delta_Rv0954 | 0.057 | 0.172 |
| PonA1 | -0.471 | -0.128 |
| EccD1_KO | -0.97 | 0.697 |
| EspI_KO | -0.399 | 0.211 |
| PE35_KO | 0.19 | 0.117 |
| PPE68_KO | 0.058 | 0.038 |
| glycerol2 | -1.047 | -0.041 |
| lignocerate | -0.585 | 0.516 |
| oleate | -1.093 | 0.0 |
| phosphatidylcholine | -1.08 | 0.494 |
| acetate | 0.339 | 0.116 |
| glucAc | -0.016 | 0.086 |
| Rv0950ko | 0.103 | 0.555 |
| Rv1096ko | -1.224 | -0.537 |
| Rv3684ko | -1.241 | -0.442 |
| delta_otsA_trehalose | 0.495 | -0.722 |