Top 10 genes with highest correlation to Rv1788/PE18:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0491/regX3 | (cc=0.4642) | info on Rv0491/regX3 |
| Rv1143/mcr | (cc=0.4274) | info on Rv1143/mcr |
| Rv1793/esxN | (cc=0.4126) | info on Rv1793/esxN |
| Rv1725c/- | (cc=0.3988) | info on Rv1725c/- |
| Rv3061c/fadE22 | (cc=0.3938) | info on Rv3061c/fadE22 |
| Rv0083/- | (cc=0.3891) | info on Rv0083/- |
| Rv0232/- | (cc=0.3867) | info on Rv0232/- |
| Rv2851c/- | (cc=0.3748) | info on Rv2851c/- |
| Rv0438c/moeA2 | (cc=0.373) | info on Rv0438c/moeA2 |
| Rv1790/PPE27 | (cc=0.3681) | info on Rv1790/PPE27 |
Correlation of Rv1788/PE18 with Rv0491/regX3
Normalized LFCs for Rv1788/PE18:
(description and provenance of datasets)
| Rv1788/PE18 | Rv0491/regX3 | |
| Fe_supp_jason_reseq | -1.127 | -0.193 |
| low_pH_jason_reseq | 0.348 | -1.236 |
| NO_jason_reseq | 2.292 | 0.945 |
| B6_jason_reseq | -1.043 | -0.114 |
| MHCII_jason_reseq | -0.869 | -1.972 |
| Isoniazid02 | -0.058 | 1.003 |
| Rifampicin4 | -0.19 | -0.16 |
| Ethambutol3 | -0.143 | 0.888 |
| Meropenem3 | -0.043 | -0.032 |
| Vancomycin16 | -0.783 | -0.024 |
| Rv2680_day32 | -0.039 | -1.554 |
| H37Rv_KO_MarP | 0.127 | 0.456 |
| hypoxia_3wks | 0.068 | 0.69 |
| hypoxia_6wks | 0.161 | 0.574 |
| glycerol | -0.129 | 0.127 |
| cholesterol | -0.56 | 0.608 |
| AJ | -0.997 | -1.14 |
| Bibs02 | 0.543 | -0.033 |
| Bibs02c | 0.276 | -0.756 |
| BL6 | 0.062 | -1.385 |
| BL6a | 0.525 | -0.854 |
| BXD01 | -0.261 | -0.951 |
| BXD010 | -0.405 | -0.832 |
| BXD011 | 0.597 | -0.3 |
| BXD03 | -0.071 | -0.987 |
| BXD04 | -0.129 | 0.783 |
| BXD05 | 0.105 | -0.516 |
| BXD06 | -0.155 | -1.548 |
| BXD07 | 0.218 | -0.826 |
| BXD08 | -0.211 | -0.195 |
| BXD09 | -0.286 | -0.808 |
| CAST | -0.455 | -1.458 |
| CCcont | 0.217 | 0.128 |
| DS01 | 0.072 | -0.236 |
| DS02 | 0.158 | 0.342 |
| DS04 | 0.128 | -0.607 |
| DS0c | -0.311 | -0.544 |
| GP01 | 0.227 | -0.543 |
| GP02 | 0.761 | -0.247 |
| GP0c | 0.704 | -0.195 |
| NOD | -0.67 | -0.822 |
| NZO | -0.159 | -0.782 |
| PWK | 0.352 | -1.108 |
| H37Rv_KO_CtpC | 0.173 | -0.069 |
| H37Rv_KO_CtpD | -1.465 | -1.011 |
| H37Rv_KO_Rv1272 | -0.239 | -0.647 |
| H37Rv_KO_SugABC | -0.435 | -0.135 |
| H37Rv_KO_MbtN | -0.221 | -0.399 |
| Trans05 | -0.966 | -0.827 |
| macrophage_unactivated | 0.379 | 0.101 |
| IL1 | 0.688 | 0.062 |
| Rapamycin | 1.105 | 0.626 |
| Tcell | 0.743 | 0.169 |
| GMCSF | 0.826 | 1.323 |
| IFNab | 0.333 | 0.142 |
| IFNg | 1.502 | 0.508 |
| IFNg_GMCSF1 | 1.427 | 1.031 |
| Rv1432_day32 | 0.765 | 1.617 |
| Rv1565c_day32 | -0.325 | -1.046 |
| secA2_input | 0.246 | 0.391 |
| delta_Rv3594 | 0.047 | 0.084 |
| delta_Rv3717 | -0.07 | -0.41 |
| delta_Rv3811 | -0.41 | -0.077 |
| delta_Rv0954 | -0.231 | 0.521 |
| PonA1 | 0.56 | 0.452 |
| EccD1_KO | 1.023 | 0.112 |
| EspI_KO | 0.2 | -0.924 |
| PE35_KO | 0.0 | -0.785 |
| PPE68_KO | -0.25 | -1.091 |
| glycerol2 | 1.09 | 0.967 |
| lignocerate | 0.832 | 1.08 |
| oleate | 1.381 | 0.624 |
| phosphatidylcholine | 1.249 | 0.805 |
| acetate | 0.472 | -0.354 |
| glucAc | 0.313 | 0.45 |
| Rv0950ko | -0.847 | -0.16 |
| Rv1096ko | 0.287 | 0.477 |
| Rv3684ko | 0.632 | 0.115 |
| delta_otsA_trehalose | -1.6 | 0.535 |