Top 10 genes with highest correlation to Rv1788/PE18:
update plot | correlation | link to info on gene |
---|---|---|
Rv0491/regX3 | (cc=0.4642) | info on Rv0491/regX3 |
Rv1143/mcr | (cc=0.4274) | info on Rv1143/mcr |
Rv1793/esxN | (cc=0.4126) | info on Rv1793/esxN |
Rv1725c/- | (cc=0.3988) | info on Rv1725c/- |
Rv3061c/fadE22 | (cc=0.3938) | info on Rv3061c/fadE22 |
Rv0083/- | (cc=0.3891) | info on Rv0083/- |
Rv0232/- | (cc=0.3867) | info on Rv0232/- |
Rv2851c/- | (cc=0.3748) | info on Rv2851c/- |
Rv0438c/moeA2 | (cc=0.373) | info on Rv0438c/moeA2 |
Rv1790/PPE27 | (cc=0.3681) | info on Rv1790/PPE27 |
Correlation of Rv1788/PE18 with Rv2851c/-
Normalized LFCs for Rv1788/PE18:
(description and provenance of datasets)
Rv1788/PE18 | Rv2851c/- | |
Fe_supp_jason_reseq | -1.127 | -0.021 |
low_pH_jason_reseq | 0.348 | -0.852 |
NO_jason_reseq | 2.292 | 2.539 |
B6_jason_reseq | -1.043 | 0.843 |
MHCII_jason_reseq | -0.869 | 1.51 |
Isoniazid02 | -0.058 | 0.781 |
Rifampicin4 | -0.19 | -0.319 |
Ethambutol3 | -0.143 | 0.14 |
Meropenem3 | -0.043 | 0.478 |
Vancomycin16 | -0.783 | -0.653 |
Rv2680_day32 | -0.039 | 1.779 |
H37Rv_KO_MarP | 0.127 | 0.562 |
hypoxia_3wks | 0.068 | 0.809 |
hypoxia_6wks | 0.161 | 0.472 |
glycerol | -0.129 | 0.884 |
cholesterol | -0.56 | -1.323 |
AJ | -0.997 | -0.484 |
Bibs02 | 0.543 | 0.0 |
Bibs02c | 0.276 | -0.217 |
BL6 | 0.062 | 0.463 |
BL6a | 0.525 | 0.08 |
BXD01 | -0.261 | 0.373 |
BXD010 | -0.405 | 0.052 |
BXD011 | 0.597 | 0.149 |
BXD03 | -0.071 | -0.99 |
BXD04 | -0.129 | 0.744 |
BXD05 | 0.105 | 0.514 |
BXD06 | -0.155 | -0.091 |
BXD07 | 0.218 | -0.131 |
BXD08 | -0.211 | 0.589 |
BXD09 | -0.286 | 1.403 |
CAST | -0.455 | -1.333 |
CCcont | 0.217 | 0.612 |
DS01 | 0.072 | -0.517 |
DS02 | 0.158 | 1.549 |
DS04 | 0.128 | -0.632 |
DS0c | -0.311 | 0.635 |
GP01 | 0.227 | 2.288 |
GP02 | 0.761 | 0.201 |
GP0c | 0.704 | 1.225 |
NOD | -0.67 | -0.835 |
NZO | -0.159 | 0.533 |
PWK | 0.352 | -0.776 |
H37Rv_KO_CtpC | 0.173 | 0.248 |
H37Rv_KO_CtpD | -1.465 | 0.484 |
H37Rv_KO_Rv1272 | -0.239 | 0.609 |
H37Rv_KO_SugABC | -0.435 | 2.202 |
H37Rv_KO_MbtN | -0.221 | 1.314 |
Trans05 | -0.966 | 1.236 |
macrophage_unactivated | 0.379 | 0.956 |
IL1 | 0.688 | 1.777 |
Rapamycin | 1.105 | 2.55 |
Tcell | 0.743 | 1.033 |
GMCSF | 0.826 | 1.067 |
IFNab | 0.333 | 0.051 |
IFNg | 1.502 | 3.814 |
IFNg_GMCSF1 | 1.427 | 4.286 |
Rv1432_day32 | 0.765 | 1.601 |
Rv1565c_day32 | -0.325 | -0.31 |
secA2_input | 0.246 | -0.56 |
delta_Rv3594 | 0.047 | 0.716 |
delta_Rv3717 | -0.07 | 0.405 |
delta_Rv3811 | -0.41 | 0.882 |
delta_Rv0954 | -0.231 | 0.031 |
PonA1 | 0.56 | -1.27 |
EccD1_KO | 1.023 | 0.789 |
EspI_KO | 0.2 | 0.819 |
PE35_KO | 0.0 | 0.289 |
PPE68_KO | -0.25 | 0.451 |
glycerol2 | 1.09 | 3.544 |
lignocerate | 0.832 | 3.187 |
oleate | 1.381 | -1.418 |
phosphatidylcholine | 1.249 | 3.27 |
acetate | 0.472 | 2.809 |
glucAc | 0.313 | 2.649 |
Rv0950ko | -0.847 | 0.585 |
Rv1096ko | 0.287 | 0.558 |
Rv3684ko | 0.632 | 1.041 |
delta_otsA_trehalose | -1.6 | 2.311 |