Top 10 genes with highest correlation to Rv1778c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0526/- | (cc=0.4802) | info on Rv0526/- |
| Rv2169c/- | (cc=0.4488) | info on Rv2169c/- |
| Rv0781/ptrBa | (cc=0.4487) | info on Rv0781/ptrBa |
| Rv1752/- | (cc=0.434) | info on Rv1752/- |
| Rv1209/- | (cc=0.4316) | info on Rv1209/- |
| Rv1116/- | (cc=0.4252) | info on Rv1116/- |
| Rv3455c/truA | (cc=0.4214) | info on Rv3455c/truA |
| Rv1257c/- | (cc=0.4194) | info on Rv1257c/- |
| Rv3193c/- | (cc=0.4167) | info on Rv3193c/- |
| Rv2492/- | (cc=0.4111) | info on Rv2492/- |
Correlation of Rv1778c/- with Rv1257c/-
Normalized LFCs for Rv1778c/-:
(description and provenance of datasets)
| Rv1778c/- | Rv1257c/- | |
| Fe_supp_jason_reseq | 1.766 | 1.328 |
| low_pH_jason_reseq | 1.456 | 0.099 |
| NO_jason_reseq | 1.578 | 1.168 |
| B6_jason_reseq | -0.237 | 0.427 |
| MHCII_jason_reseq | 0.265 | 0.234 |
| Isoniazid02 | 0.079 | 1.196 |
| Rifampicin4 | -1.208 | 0.179 |
| Ethambutol3 | 1.375 | 1.164 |
| Meropenem3 | -0.69 | -0.125 |
| Vancomycin16 | -0.355 | 0.088 |
| Rv2680_day32 | -1.595 | -0.586 |
| H37Rv_KO_MarP | -0.267 | 0.694 |
| hypoxia_3wks | 0.594 | 0.096 |
| hypoxia_6wks | 2.088 | 0.05 |
| glycerol | -1.678 | -0.339 |
| cholesterol | 0.812 | -0.371 |
| AJ | 2.558 | 0.047 |
| Bibs02 | -0.744 | -0.518 |
| Bibs02c | -0.071 | 0.85 |
| BL6 | 1.505 | -0.725 |
| BL6a | 1.716 | 1.102 |
| BXD01 | 1.324 | 0.6 |
| BXD010 | 0.743 | 1.13 |
| BXD011 | 1.006 | 0.207 |
| BXD03 | 0.25 | 0.471 |
| BXD04 | 1.637 | -0.052 |
| BXD05 | -0.248 | 0.041 |
| BXD06 | 0.55 | 0.157 |
| BXD07 | 1.91 | 0.309 |
| BXD08 | 0.608 | 0.193 |
| BXD09 | 0.22 | -0.153 |
| CAST | 0.0 | 0.205 |
| CCcont | 1.812 | -0.215 |
| DS01 | -0.164 | 0.527 |
| DS02 | -0.488 | 0.485 |
| DS04 | -0.992 | -0.326 |
| DS0c | 0.894 | 0.773 |
| GP01 | -0.749 | -0.393 |
| GP02 | -0.339 | 0.338 |
| GP0c | 1.182 | 0.634 |
| NOD | -1.276 | 1.604 |
| NZO | 1.607 | 0.377 |
| PWK | 0.897 | 0.266 |
| H37Rv_KO_CtpC | 0.254 | 0.672 |
| H37Rv_KO_CtpD | -1.256 | 0.051 |
| H37Rv_KO_Rv1272 | 1.711 | -0.272 |
| H37Rv_KO_SugABC | -1.171 | 0.088 |
| H37Rv_KO_MbtN | -0.231 | -1.173 |
| Trans05 | -0.044 | 0.28 |
| macrophage_unactivated | 0.546 | -0.073 |
| IL1 | 0.433 | 0.483 |
| Rapamycin | 1.7 | -0.037 |
| Tcell | 1.737 | 0.147 |
| GMCSF | -0.52 | -0.092 |
| IFNab | 0.686 | 0.647 |
| IFNg | -0.82 | -0.708 |
| IFNg_GMCSF1 | -0.845 | -0.792 |
| Rv1432_day32 | -0.258 | -0.321 |
| Rv1565c_day32 | -0.25 | -0.027 |
| secA2_input | -0.759 | -1.268 |
| delta_Rv3594 | -0.841 | -0.564 |
| delta_Rv3717 | -0.629 | -0.561 |
| delta_Rv3811 | 0.834 | -0.76 |
| delta_Rv0954 | -0.243 | 0.0 |
| PonA1 | -1.978 | -0.155 |
| EccD1_KO | 0.865 | -0.043 |
| EspI_KO | 0.95 | 0.451 |
| PE35_KO | 1.295 | 0.219 |
| PPE68_KO | 1.213 | -0.042 |
| glycerol2 | -2.061 | -1.149 |
| lignocerate | -1.286 | -0.606 |
| oleate | -2.196 | -0.922 |
| phosphatidylcholine | -1.375 | -0.437 |
| acetate | -1.049 | -0.6 |
| glucAc | -1.301 | -0.632 |
| Rv0950ko | 2.249 | 0.371 |
| Rv1096ko | 1.218 | 0.914 |
| Rv3684ko | 0.485 | 0.684 |
| delta_otsA_trehalose | -0.77 | 0.429 |