Top 10 genes with highest correlation to Rv1762c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2071c/cobM | (cc=0.4739) | info on Rv2071c/cobM |
| Rv0235c/- | (cc=0.443) | info on Rv0235c/- |
| Rv1960c/parD1 | (cc=0.4359) | info on Rv1960c/parD1 |
| Rv2464c/- | (cc=0.3922) | info on Rv2464c/- |
| Rv0945/- | (cc=0.3907) | info on Rv0945/- |
| Rv3213c/- | (cc=0.3883) | info on Rv3213c/- |
| Rv1796/mycP5 | (cc=0.3769) | info on Rv1796/mycP5 |
| Rv0782/ptrBb | (cc=0.3762) | info on Rv0782/ptrBb |
| Rv1618/tesB1 | (cc=0.3694) | info on Rv1618/tesB1 |
| Rv3176c/mesT | (cc=0.3687) | info on Rv3176c/mesT |
Correlation of Rv1762c/- with Rv2071c/cobM
Normalized LFCs for Rv1762c/-:
(description and provenance of datasets)
| Rv1762c/- | Rv2071c/cobM | |
| Fe_supp_jason_reseq | -0.385 | -0.581 |
| low_pH_jason_reseq | -1.228 | -0.599 |
| NO_jason_reseq | 0.354 | -0.084 |
| B6_jason_reseq | -0.251 | -1.398 |
| MHCII_jason_reseq | 0.447 | -1.519 |
| Isoniazid02 | 0.754 | 1.014 |
| Rifampicin4 | -0.26 | 0.143 |
| Ethambutol3 | -0.212 | 1.172 |
| Meropenem3 | -0.087 | 0.476 |
| Vancomycin16 | 0.385 | 0.093 |
| Rv2680_day32 | 1.324 | 1.19 |
| H37Rv_KO_MarP | -0.512 | -0.128 |
| hypoxia_3wks | -1.587 | -0.343 |
| hypoxia_6wks | -0.831 | -0.447 |
| glycerol | 1.062 | 1.027 |
| cholesterol | 1.27 | 0.585 |
| AJ | 0.21 | -0.113 |
| Bibs02 | -0.136 | 0.102 |
| Bibs02c | -0.928 | -0.186 |
| BL6 | -0.261 | 0.405 |
| BL6a | 0.096 | 0.0 |
| BXD01 | 0.195 | 0.632 |
| BXD010 | 0.247 | 0.254 |
| BXD011 | 0.325 | 0.312 |
| BXD03 | 0.845 | 0.3 |
| BXD04 | 0.613 | 0.524 |
| BXD05 | 0.247 | 0.145 |
| BXD06 | 0.335 | 0.376 |
| BXD07 | 0.401 | 0.468 |
| BXD08 | 0.072 | 0.899 |
| BXD09 | 0.504 | 0.354 |
| CAST | -0.092 | -0.135 |
| CCcont | 0.252 | 0.852 |
| DS01 | -0.59 | -0.091 |
| DS02 | 0.106 | -0.106 |
| DS04 | -0.828 | -0.319 |
| DS0c | -0.853 | -0.083 |
| GP01 | 1.302 | 1.257 |
| GP02 | 1.499 | 1.231 |
| GP0c | 1.222 | 1.225 |
| NOD | -0.089 | 1.355 |
| NZO | -0.272 | -0.488 |
| PWK | -0.82 | 0.091 |
| H37Rv_KO_CtpC | 0.844 | 0.105 |
| H37Rv_KO_CtpD | -0.89 | 0.936 |
| H37Rv_KO_Rv1272 | -0.081 | 0.693 |
| H37Rv_KO_SugABC | 0.804 | 1.0 |
| H37Rv_KO_MbtN | 0.006 | 0.85 |
| Trans05 | 0.769 | 0.57 |
| macrophage_unactivated | -0.038 | -0.874 |
| IL1 | 0.139 | -0.575 |
| Rapamycin | -1.046 | -0.255 |
| Tcell | -0.577 | -1.15 |
| GMCSF | 0.14 | -0.364 |
| IFNab | 0.142 | -0.218 |
| IFNg | -0.08 | -0.74 |
| IFNg_GMCSF1 | -0.352 | -0.097 |
| Rv1432_day32 | -0.206 | -0.297 |
| Rv1565c_day32 | -0.107 | -0.032 |
| secA2_input | 0.409 | 0.888 |
| delta_Rv3594 | 0.171 | -0.459 |
| delta_Rv3717 | 0.744 | -0.237 |
| delta_Rv3811 | 0.479 | -0.373 |
| delta_Rv0954 | 0.643 | -0.377 |
| PonA1 | 0.055 | -0.735 |
| EccD1_KO | -0.28 | -0.674 |
| EspI_KO | 0.485 | -0.282 |
| PE35_KO | 0.475 | 0.216 |
| PPE68_KO | 0.326 | -0.093 |
| glycerol2 | 0.42 | 0.242 |
| lignocerate | 0.859 | 0.261 |
| oleate | -0.16 | 0.333 |
| phosphatidylcholine | 0.522 | 0.466 |
| acetate | 0.135 | -0.18 |
| glucAc | 0.519 | 0.0 |
| Rv0950ko | 0.356 | 0.121 |
| Rv1096ko | -0.477 | -0.881 |
| Rv3684ko | -0.773 | -0.757 |
| delta_otsA_trehalose | 0.084 | 0.164 |