Top 10 genes with highest correlation to Rv1758/cut1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1032c/trcS | (cc=0.6474) | info on Rv1032c/trcS |
| Rv0359/- | (cc=0.6383) | info on Rv0359/- |
| Rv1104/- | (cc=0.6149) | info on Rv1104/- |
| Rv0449c/- | (cc=0.5672) | info on Rv0449c/- |
| Rv3295/- | (cc=0.5663) | info on Rv3295/- |
| Rv1735c/- | (cc=0.5598) | info on Rv1735c/- |
| Rv0228/- | (cc=0.541) | info on Rv0228/- |
| Rv1953/vapC14 | (cc=0.5238) | info on Rv1953/vapC14 |
| Rv0447c/ufaA1 | (cc=0.5205) | info on Rv0447c/ufaA1 |
| Rv1736c/narX | (cc=0.5193) | info on Rv1736c/narX |
Correlation of Rv1758/cut1 with Rv1032c/trcS
Normalized LFCs for Rv1758/cut1:
(description and provenance of datasets)
| Rv1758/cut1 | Rv1032c/trcS | |
| Fe_supp_jason_reseq | 0.518 | 1.105 |
| low_pH_jason_reseq | -0.43 | -0.03 |
| NO_jason_reseq | 0.606 | 1.137 |
| B6_jason_reseq | 0.666 | 1.216 |
| MHCII_jason_reseq | 0.414 | 0.905 |
| Isoniazid02 | 1.206 | 0.697 |
| Rifampicin4 | -0.912 | -0.024 |
| Ethambutol3 | -0.399 | 0.691 |
| Meropenem3 | 0.484 | 0.374 |
| Vancomycin16 | -0.602 | 0.021 |
| Rv2680_day32 | 0.178 | 0.074 |
| H37Rv_KO_MarP | 0.457 | 0.652 |
| hypoxia_3wks | 0.207 | 0.112 |
| hypoxia_6wks | 0.205 | -0.311 |
| glycerol | -0.667 | -0.29 |
| cholesterol | -0.841 | -0.243 |
| AJ | -0.104 | 0.365 |
| Bibs02 | -0.094 | -0.993 |
| Bibs02c | -0.07 | -0.352 |
| BL6 | -1.614 | -0.772 |
| BL6a | -0.957 | -0.672 |
| BXD01 | -1.178 | -0.507 |
| BXD010 | -0.119 | -0.774 |
| BXD011 | -0.452 | -0.563 |
| BXD03 | -0.792 | -0.432 |
| BXD04 | -0.963 | -0.481 |
| BXD05 | -0.761 | -0.831 |
| BXD06 | -0.875 | -0.824 |
| BXD07 | -0.776 | -0.72 |
| BXD08 | -0.387 | -0.646 |
| BXD09 | -0.541 | -0.941 |
| CAST | -0.607 | -0.312 |
| CCcont | -1.612 | -0.394 |
| DS01 | 0.207 | -0.282 |
| DS02 | -0.265 | -0.695 |
| DS04 | 0.011 | 0.132 |
| DS0c | -0.146 | -0.328 |
| GP01 | 0.023 | 0.257 |
| GP02 | 1.431 | 0.309 |
| GP0c | 0.265 | -0.019 |
| NOD | 0.257 | 0.561 |
| NZO | 0.186 | -0.526 |
| PWK | 0.519 | 0.831 |
| H37Rv_KO_CtpC | -0.807 | -1.154 |
| H37Rv_KO_CtpD | -0.673 | -0.417 |
| H37Rv_KO_Rv1272 | 0.157 | -0.191 |
| H37Rv_KO_SugABC | -0.607 | -0.029 |
| H37Rv_KO_MbtN | -1.249 | -1.493 |
| Trans05 | -0.612 | -0.536 |
| macrophage_unactivated | -0.975 | -0.66 |
| IL1 | -0.813 | -0.914 |
| Rapamycin | -0.362 | -0.893 |
| Tcell | -0.893 | -1.059 |
| GMCSF | -0.232 | -0.385 |
| IFNab | -0.998 | -0.535 |
| IFNg | -0.061 | -1.109 |
| IFNg_GMCSF1 | -0.035 | -0.968 |
| Rv1432_day32 | 0.592 | -0.134 |
| Rv1565c_day32 | -0.188 | -0.28 |
| secA2_input | 0.374 | -0.363 |
| delta_Rv3594 | -0.144 | -0.095 |
| delta_Rv3717 | 0.797 | -0.413 |
| delta_Rv3811 | 0.57 | 0.036 |
| delta_Rv0954 | -0.023 | -0.82 |
| PonA1 | -0.143 | -0.043 |
| EccD1_KO | 0.27 | 0.516 |
| EspI_KO | 0.02 | 0.71 |
| PE35_KO | -0.105 | 0.169 |
| PPE68_KO | -0.256 | 0.4 |
| glycerol2 | 0.104 | -0.157 |
| lignocerate | -0.123 | 0.144 |
| oleate | 0.651 | 0.064 |
| phosphatidylcholine | 0.168 | 0.262 |
| acetate | -0.281 | 0.125 |
| glucAc | -0.784 | 0.179 |
| Rv0950ko | 0.902 | 0.793 |
| Rv1096ko | 0.923 | 1.463 |
| Rv3684ko | 1.444 | 1.009 |
| delta_otsA_trehalose | -0.225 | 0.003 |