Top 10 genes with highest correlation to Rv1719/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1429/- | (cc=0.5422) | info on Rv1429/- |
| Rv3058c/- | (cc=0.5259) | info on Rv3058c/- |
| Rv3056/dinP | (cc=0.4957) | info on Rv3056/dinP |
| Rv1069c/- | (cc=0.4835) | info on Rv1069c/- |
| Rv3059/cyp136 | (cc=0.456) | info on Rv3059/cyp136 |
| Rv3786c/- | (cc=0.4544) | info on Rv3786c/- |
| Rv2149c/yfiH | (cc=0.4522) | info on Rv2149c/yfiH |
| Rv3463/- | (cc=0.4472) | info on Rv3463/- |
| Rv1057/- | (cc=0.4453) | info on Rv1057/- |
| Rv3284/- | (cc=0.4403) | info on Rv3284/- |
Correlation of Rv1719/- with Rv3463/-
Normalized LFCs for Rv1719/-:
(description and provenance of datasets)
| Rv1719/- | Rv3463/- | |
| Fe_supp_jason_reseq | 1.1 | -0.474 |
| low_pH_jason_reseq | -1.044 | -0.557 |
| NO_jason_reseq | -1.336 | -0.732 |
| B6_jason_reseq | 0.514 | 0.192 |
| MHCII_jason_reseq | 0.244 | -0.018 |
| Isoniazid02 | -0.469 | -0.997 |
| Rifampicin4 | -0.325 | -0.046 |
| Ethambutol3 | 2.551 | 0.491 |
| Meropenem3 | -0.22 | 0.906 |
| Vancomycin16 | -0.669 | -0.249 |
| Rv2680_day32 | 0.109 | -0.349 |
| H37Rv_KO_MarP | 2.004 | 1.239 |
| hypoxia_3wks | -2.791 | 0.104 |
| hypoxia_6wks | -2.088 | -0.48 |
| glycerol | 0.195 | 0.436 |
| cholesterol | -1.872 | -0.369 |
| AJ | 1.412 | -0.348 |
| Bibs02 | 0.313 | -0.436 |
| Bibs02c | 1.234 | 0.149 |
| BL6 | -0.391 | -0.477 |
| BL6a | 0.578 | -0.297 |
| BXD01 | -0.859 | -0.246 |
| BXD010 | -2.091 | -0.202 |
| BXD011 | -0.687 | -0.601 |
| BXD03 | 0.412 | -0.311 |
| BXD04 | 0.176 | 0.516 |
| BXD05 | 0.088 | 0.026 |
| BXD06 | -0.683 | -0.296 |
| BXD07 | -1.373 | -0.377 |
| BXD08 | -0.877 | 0.135 |
| BXD09 | -0.073 | -0.496 |
| CAST | 0.038 | 0.409 |
| CCcont | -0.159 | -0.248 |
| DS01 | 0.335 | -0.265 |
| DS02 | -1.112 | 0.469 |
| DS04 | 1.532 | 0.365 |
| DS0c | 1.571 | 1.037 |
| GP01 | -0.979 | -0.833 |
| GP02 | -1.075 | -0.753 |
| GP0c | 0.476 | -0.626 |
| NOD | 0.182 | 0.36 |
| NZO | -0.623 | 0.25 |
| PWK | -0.102 | 0.077 |
| H37Rv_KO_CtpC | 0.926 | -0.033 |
| H37Rv_KO_CtpD | 1.134 | -1.108 |
| H37Rv_KO_Rv1272 | -2.42 | -0.976 |
| H37Rv_KO_SugABC | -1.28 | 0.465 |
| H37Rv_KO_MbtN | -0.856 | -0.508 |
| Trans05 | -1.296 | -0.629 |
| macrophage_unactivated | -1.016 | -1.689 |
| IL1 | 0.561 | -0.887 |
| Rapamycin | 0.175 | -1.059 |
| Tcell | 0.094 | -0.124 |
| GMCSF | -0.156 | 0.0 |
| IFNab | -0.363 | -1.079 |
| IFNg | -0.764 | -0.799 |
| IFNg_GMCSF1 | -0.377 | -0.729 |
| Rv1432_day32 | -0.289 | -0.438 |
| Rv1565c_day32 | -1.474 | -0.69 |
| secA2_input | 0.108 | 0.964 |
| delta_Rv3594 | -1.724 | -0.659 |
| delta_Rv3717 | -2.411 | -0.059 |
| delta_Rv3811 | -1.266 | -1.136 |
| delta_Rv0954 | 0.402 | -0.682 |
| PonA1 | 1.072 | -0.815 |
| EccD1_KO | 1.503 | 0.03 |
| EspI_KO | 0.462 | 0.148 |
| PE35_KO | -0.073 | -0.105 |
| PPE68_KO | -0.496 | 0.0 |
| glycerol2 | 2.916 | 1.401 |
| lignocerate | 0.712 | 0.426 |
| oleate | 0.292 | 0.024 |
| phosphatidylcholine | 4.165 | 0.819 |
| acetate | -0.329 | -0.414 |
| glucAc | -1.034 | -0.555 |
| Rv0950ko | 0.145 | 0.639 |
| Rv1096ko | 0.217 | 0.317 |
| Rv3684ko | 0.0 | -0.973 |
| delta_otsA_trehalose | 0.778 | 0.0 |