Top 10 genes with highest correlation to Rv1719/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1429/- | (cc=0.5422) | info on Rv1429/- |
| Rv3058c/- | (cc=0.5259) | info on Rv3058c/- |
| Rv3056/dinP | (cc=0.4957) | info on Rv3056/dinP |
| Rv1069c/- | (cc=0.4835) | info on Rv1069c/- |
| Rv3059/cyp136 | (cc=0.456) | info on Rv3059/cyp136 |
| Rv3786c/- | (cc=0.4544) | info on Rv3786c/- |
| Rv2149c/yfiH | (cc=0.4522) | info on Rv2149c/yfiH |
| Rv3463/- | (cc=0.4472) | info on Rv3463/- |
| Rv1057/- | (cc=0.4453) | info on Rv1057/- |
| Rv3284/- | (cc=0.4403) | info on Rv3284/- |
Correlation of Rv1719/- with Rv1429/-
Normalized LFCs for Rv1719/-:
(description and provenance of datasets)
| Rv1719/- | Rv1429/- | |
| Fe_supp_jason_reseq | 1.1 | 0.548 |
| low_pH_jason_reseq | -1.044 | -0.415 |
| NO_jason_reseq | -1.336 | 0.142 |
| B6_jason_reseq | 0.514 | 0.463 |
| MHCII_jason_reseq | 0.244 | 0.589 |
| Isoniazid02 | -0.469 | -0.314 |
| Rifampicin4 | -0.325 | 0.049 |
| Ethambutol3 | 2.551 | -0.251 |
| Meropenem3 | -0.22 | -0.722 |
| Vancomycin16 | -0.669 | -0.199 |
| Rv2680_day32 | 0.109 | -0.481 |
| H37Rv_KO_MarP | 2.004 | 0.728 |
| hypoxia_3wks | -2.791 | -0.439 |
| hypoxia_6wks | -2.088 | -0.407 |
| glycerol | 0.195 | -0.59 |
| cholesterol | -1.872 | -0.744 |
| AJ | 1.412 | 0.094 |
| Bibs02 | 0.313 | -0.019 |
| Bibs02c | 1.234 | -0.182 |
| BL6 | -0.391 | -0.621 |
| BL6a | 0.578 | -0.276 |
| BXD01 | -0.859 | -0.636 |
| BXD010 | -2.091 | -0.523 |
| BXD011 | -0.687 | 0.197 |
| BXD03 | 0.412 | -0.279 |
| BXD04 | 0.176 | 0.727 |
| BXD05 | 0.088 | -0.007 |
| BXD06 | -0.683 | -0.708 |
| BXD07 | -1.373 | -0.081 |
| BXD08 | -0.877 | 0.169 |
| BXD09 | -0.073 | -0.373 |
| CAST | 0.038 | 0.239 |
| CCcont | -0.159 | -0.899 |
| DS01 | 0.335 | -0.286 |
| DS02 | -1.112 | -0.547 |
| DS04 | 1.532 | 0.53 |
| DS0c | 1.571 | 0.121 |
| GP01 | -0.979 | -0.977 |
| GP02 | -1.075 | -0.177 |
| GP0c | 0.476 | -0.869 |
| NOD | 0.182 | 0.034 |
| NZO | -0.623 | 0.698 |
| PWK | -0.102 | -0.628 |
| H37Rv_KO_CtpC | 0.926 | 0.424 |
| H37Rv_KO_CtpD | 1.134 | 0.246 |
| H37Rv_KO_Rv1272 | -2.42 | -1.513 |
| H37Rv_KO_SugABC | -1.28 | 0.079 |
| H37Rv_KO_MbtN | -0.856 | -0.785 |
| Trans05 | -1.296 | -0.363 |
| macrophage_unactivated | -1.016 | -0.227 |
| IL1 | 0.561 | -0.166 |
| Rapamycin | 0.175 | 0.233 |
| Tcell | 0.094 | -0.209 |
| GMCSF | -0.156 | -0.042 |
| IFNab | -0.363 | -0.638 |
| IFNg | -0.764 | -0.444 |
| IFNg_GMCSF1 | -0.377 | -0.305 |
| Rv1432_day32 | -0.289 | 0.274 |
| Rv1565c_day32 | -1.474 | 0.006 |
| secA2_input | 0.108 | -0.016 |
| delta_Rv3594 | -1.724 | 0.044 |
| delta_Rv3717 | -2.411 | -0.486 |
| delta_Rv3811 | -1.266 | 0.128 |
| delta_Rv0954 | 0.402 | 0.556 |
| PonA1 | 1.072 | 0.763 |
| EccD1_KO | 1.503 | 0.385 |
| EspI_KO | 0.462 | 1.252 |
| PE35_KO | -0.073 | 0.866 |
| PPE68_KO | -0.496 | 0.688 |
| glycerol2 | 2.916 | 1.389 |
| lignocerate | 0.712 | -0.117 |
| oleate | 0.292 | 0.447 |
| phosphatidylcholine | 4.165 | 0.969 |
| acetate | -0.329 | -0.143 |
| glucAc | -1.034 | -0.379 |
| Rv0950ko | 0.145 | 0.431 |
| Rv1096ko | 0.217 | 0.347 |
| Rv3684ko | 0.0 | 0.098 |
| delta_otsA_trehalose | 0.778 | 0.051 |