Top 10 genes with highest correlation to Rv1697/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3410c/guaB3 | (cc=0.6225) | info on Rv3410c/guaB3 |
| Rv1290c/- | (cc=0.5951) | info on Rv1290c/- |
| Rv2393/che1 | (cc=0.5683) | info on Rv2393/che1 |
| Rv1495/mazF4 | (cc=0.5604) | info on Rv1495/mazF4 |
| Rv3906c/- | (cc=0.5534) | info on Rv3906c/- |
| Rv3754/tyrA | (cc=0.5337) | info on Rv3754/tyrA |
| Rv2333c/stp | (cc=0.5208) | info on Rv2333c/stp |
| Rv1944c/- | (cc=0.5007) | info on Rv1944c/- |
| Rv2708c/- | (cc=0.4914) | info on Rv2708c/- |
| Rv1324/- | (cc=0.4914) | info on Rv1324/- |
Correlation of Rv1697/- with Rv2333c/stp
Normalized LFCs for Rv1697/-:
(description and provenance of datasets)
| Rv1697/- | Rv2333c/stp | |
| Fe_supp_jason_reseq | 0.0 | 0.278 |
| low_pH_jason_reseq | 0.0 | -0.611 |
| NO_jason_reseq | 0.0 | -0.404 |
| B6_jason_reseq | 0.0 | 0.446 |
| MHCII_jason_reseq | 0.0 | 0.189 |
| Isoniazid02 | 4.812 | 2.51 |
| Rifampicin4 | 0.0 | 0.249 |
| Ethambutol3 | 1.031 | 1.744 |
| Meropenem3 | 0.0 | 0.189 |
| Vancomycin16 | 0.0 | 0.488 |
| Rv2680_day32 | 0.0 | -0.032 |
| H37Rv_KO_MarP | -0.195 | 0.425 |
| hypoxia_3wks | 0.0 | -0.211 |
| hypoxia_6wks | 0.0 | -0.163 |
| glycerol | 0.654 | -0.247 |
| cholesterol | 0.365 | -0.494 |
| AJ | -0.232 | 0.491 |
| Bibs02 | -0.183 | -0.125 |
| Bibs02c | -0.209 | 0.089 |
| BL6 | -0.125 | -0.171 |
| BL6a | -0.198 | -0.063 |
| BXD01 | -0.13 | -0.11 |
| BXD010 | -0.128 | 0.307 |
| BXD011 | -0.127 | 0.096 |
| BXD03 | -0.135 | 0.193 |
| BXD04 | -0.124 | 0.1 |
| BXD05 | -0.135 | 0.401 |
| BXD06 | -0.133 | 0.104 |
| BXD07 | -0.138 | 0.0 |
| BXD08 | -0.133 | 0.226 |
| BXD09 | -0.14 | 0.29 |
| CAST | -0.23 | 0.506 |
| CCcont | -0.149 | 0.037 |
| DS01 | -0.236 | 0.044 |
| DS02 | -0.217 | 0.126 |
| DS04 | 0.0 | -0.218 |
| DS0c | -0.217 | 0.189 |
| GP01 | -0.099 | -0.084 |
| GP02 | -0.083 | 0.146 |
| GP0c | -0.13 | 0.214 |
| NOD | -0.225 | 0.169 |
| NZO | -0.199 | 0.442 |
| PWK | -0.196 | 0.46 |
| H37Rv_KO_CtpC | -0.162 | 0.425 |
| H37Rv_KO_CtpD | -0.127 | 0.178 |
| H37Rv_KO_Rv1272 | -0.141 | -0.281 |
| H37Rv_KO_SugABC | 1.916 | -0.259 |
| H37Rv_KO_MbtN | 0.26 | -0.003 |
| Trans05 | -0.131 | -0.045 |
| macrophage_unactivated | 0.0 | -0.211 |
| IL1 | 0.0 | 0.205 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.0 | -0.27 |
| GMCSF | 0.0 | 0.428 |
| IFNab | 0.0 | 0.351 |
| IFNg | 0.0 | 0.299 |
| IFNg_GMCSF1 | 0.0 | -0.016 |
| Rv1432_day32 | 0.0 | 0.053 |
| Rv1565c_day32 | -0.169 | 0.866 |
| secA2_input | 0.593 | -0.686 |
| delta_Rv3594 | 0.0 | 0.471 |
| delta_Rv3717 | 0.0 | -0.201 |
| delta_Rv3811 | 0.205 | 0.11 |
| delta_Rv0954 | 0.99 | 0.538 |
| PonA1 | 0.0 | 0.355 |
| EccD1_KO | 0.0 | 0.227 |
| EspI_KO | 0.0 | 0.442 |
| PE35_KO | 0.0 | 0.0 |
| PPE68_KO | 0.841 | 0.138 |
| glycerol2 | 0.0 | -0.128 |
| lignocerate | 0.0 | 0.255 |
| oleate | 0.0 | -0.325 |
| phosphatidylcholine | 0.0 | -0.083 |
| acetate | 0.229 | -0.231 |
| glucAc | 0.0 | 0.244 |
| Rv0950ko | -1.348 | 0.296 |
| Rv1096ko | -0.302 | -0.178 |
| Rv3684ko | -1.464 | -0.462 |
| delta_otsA_trehalose | -0.133 | -0.557 |