Top 10 genes with highest correlation to Rv1696/recN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2392/cysH | (cc=0.4219) | info on Rv2392/cysH |
| Rv2521/bcp | (cc=0.3942) | info on Rv2521/bcp |
| Rv1714/- | (cc=0.3923) | info on Rv1714/- |
| Rv3550/echA20 | (cc=0.3823) | info on Rv3550/echA20 |
| Rv1406/fmt | (cc=0.3797) | info on Rv1406/fmt |
| Rv2530A/vapB39 | (cc=0.3746) | info on Rv2530A/vapB39 |
| Rv1188/- | (cc=0.3721) | info on Rv1188/- |
| Rv0633c/- | (cc=0.3673) | info on Rv0633c/- |
| Rv0650/- | (cc=0.3607) | info on Rv0650/- |
| Rv1534/- | (cc=0.3585) | info on Rv1534/- |
Correlation of Rv1696/recN with Rv1534/-
Normalized LFCs for Rv1696/recN:
(description and provenance of datasets)
| Rv1696/recN | Rv1534/- | |
| Fe_supp_jason_reseq | -0.218 | 0.834 |
| low_pH_jason_reseq | 1.051 | 1.186 |
| NO_jason_reseq | 1.299 | 0.347 |
| B6_jason_reseq | -1.184 | -0.421 |
| MHCII_jason_reseq | -0.494 | 0.676 |
| Isoniazid02 | 0.265 | -1.31 |
| Rifampicin4 | -0.076 | 0.035 |
| Ethambutol3 | -0.14 | 0.179 |
| Meropenem3 | -0.103 | 0.562 |
| Vancomycin16 | 0.0 | -0.629 |
| Rv2680_day32 | 0.816 | -0.24 |
| H37Rv_KO_MarP | -0.512 | 0.492 |
| hypoxia_3wks | 0.171 | -0.65 |
| hypoxia_6wks | -0.495 | -0.223 |
| glycerol | 0.635 | 1.325 |
| cholesterol | 0.329 | 0.844 |
| AJ | 0.729 | 0.521 |
| Bibs02 | -1.274 | -0.42 |
| Bibs02c | -1.458 | 0.206 |
| BL6 | -0.189 | -1.264 |
| BL6a | -0.577 | -0.383 |
| BXD01 | 0.036 | -1.002 |
| BXD010 | -0.194 | -1.63 |
| BXD011 | 0.07 | -0.637 |
| BXD03 | -0.446 | -0.811 |
| BXD04 | 0.1 | -1.349 |
| BXD05 | 0.212 | -0.493 |
| BXD06 | -0.492 | -1.349 |
| BXD07 | 0.283 | -1.065 |
| BXD08 | 0.499 | -1.023 |
| BXD09 | 0.186 | -0.806 |
| CAST | -0.275 | -0.796 |
| CCcont | 0.531 | -0.137 |
| DS01 | 0.792 | 0.416 |
| DS02 | 0.06 | -0.309 |
| DS04 | -0.715 | -0.836 |
| DS0c | 0.979 | 0.512 |
| GP01 | 0.808 | 0.233 |
| GP02 | -0.074 | 0.104 |
| GP0c | 0.204 | 0.519 |
| NOD | -0.34 | 0.366 |
| NZO | 0.162 | -0.029 |
| PWK | -0.114 | 0.597 |
| H37Rv_KO_CtpC | -1.32 | -0.073 |
| H37Rv_KO_CtpD | 0.596 | -0.138 |
| H37Rv_KO_Rv1272 | 0.761 | 0.061 |
| H37Rv_KO_SugABC | 0.63 | -0.174 |
| H37Rv_KO_MbtN | -1.047 | -0.762 |
| Trans05 | 0.267 | -1.27 |
| macrophage_unactivated | -1.016 | 1.215 |
| IL1 | 0.463 | -0.78 |
| Rapamycin | 0.479 | -0.522 |
| Tcell | -0.137 | 0.495 |
| GMCSF | 0.412 | -0.108 |
| IFNab | 0.124 | 0.671 |
| IFNg | 0.0 | 0.0 |
| IFNg_GMCSF1 | -0.698 | -0.396 |
| Rv1432_day32 | -1.027 | -1.212 |
| Rv1565c_day32 | 1.308 | 0.831 |
| secA2_input | 0.631 | 0.388 |
| delta_Rv3594 | 0.985 | -1.144 |
| delta_Rv3717 | 0.774 | -0.466 |
| delta_Rv3811 | 0.129 | -0.025 |
| delta_Rv0954 | 0.416 | 0.553 |
| PonA1 | 0.84 | 0.223 |
| EccD1_KO | 0.102 | 0.441 |
| EspI_KO | -0.473 | 0.0 |
| PE35_KO | -0.093 | 0.283 |
| PPE68_KO | 0.195 | 0.429 |
| glycerol2 | -0.601 | -0.426 |
| lignocerate | 0.278 | -0.636 |
| oleate | -0.457 | -0.936 |
| phosphatidylcholine | -0.181 | -0.244 |
| acetate | 1.041 | 0.565 |
| glucAc | 0.804 | 0.161 |
| Rv0950ko | 0.446 | 0.691 |
| Rv1096ko | 2.247 | 0.971 |
| Rv3684ko | 1.608 | 0.933 |
| delta_otsA_trehalose | -1.369 | -2.406 |