Top 10 genes with highest correlation to Rv1638A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0377/- | (cc=0.6094) | info on Rv0377/- |
| Rv0837c/- | (cc=0.5915) | info on Rv0837c/- |
| Rv1291c/- | (cc=0.5802) | info on Rv1291c/- |
| Rv2219A/- | (cc=0.5774) | info on Rv2219A/- |
| Rv3557c/- | (cc=0.5702) | info on Rv3557c/- |
| Rv0203/- | (cc=0.5602) | info on Rv0203/- |
| Rv1773c/- | (cc=0.5276) | info on Rv1773c/- |
| Rv1075c/- | (cc=0.5265) | info on Rv1075c/- |
| Rv1104/- | (cc=0.519) | info on Rv1104/- |
| Rv3392c/cmaA1 | (cc=0.5142) | info on Rv3392c/cmaA1 |
Correlation of Rv1638A/- with Rv0377/-
Normalized LFCs for Rv1638A/-:
(description and provenance of datasets)
| Rv1638A/- | Rv0377/- | |
| Fe_supp_jason_reseq | 0.74 | -0.655 |
| low_pH_jason_reseq | -0.192 | -0.893 |
| NO_jason_reseq | 0.415 | 1.189 |
| B6_jason_reseq | 0.982 | 0.636 |
| MHCII_jason_reseq | 0.893 | 0.217 |
| Isoniazid02 | 0.0 | 0.451 |
| Rifampicin4 | -0.374 | 0.368 |
| Ethambutol3 | -0.168 | 0.396 |
| Meropenem3 | -0.165 | 0.503 |
| Vancomycin16 | -0.366 | 0.26 |
| Rv2680_day32 | 0.0 | -0.642 |
| H37Rv_KO_MarP | -0.995 | 0.746 |
| hypoxia_3wks | 0.08 | -0.694 |
| hypoxia_6wks | 1.038 | -0.821 |
| glycerol | -0.199 | -1.173 |
| cholesterol | -1.288 | 0.323 |
| AJ | -1.708 | 0.148 |
| Bibs02 | 0.473 | 1.06 |
| Bibs02c | -1.694 | 0.441 |
| BL6 | -1.608 | -1.4 |
| BL6a | -0.439 | -0.346 |
| BXD01 | -1.055 | -1.205 |
| BXD010 | -1.548 | -0.352 |
| BXD011 | -0.64 | -1.696 |
| BXD03 | 0.062 | -1.01 |
| BXD04 | -1.406 | -0.584 |
| BXD05 | 0.444 | -0.258 |
| BXD06 | -0.296 | -1.058 |
| BXD07 | -1.052 | -1.844 |
| BXD08 | -0.032 | -1.162 |
| BXD09 | -0.138 | -0.713 |
| CAST | -0.577 | -0.766 |
| CCcont | -1.597 | -2.602 |
| DS01 | -0.814 | 0.541 |
| DS02 | -0.359 | -0.098 |
| DS04 | -0.216 | 0.649 |
| DS0c | -0.418 | 0.859 |
| GP01 | -2.256 | -1.265 |
| GP02 | -1.901 | -2.155 |
| GP0c | -2.723 | -2.122 |
| NOD | -0.81 | -0.205 |
| NZO | -0.12 | -1.29 |
| PWK | -0.023 | -0.342 |
| H37Rv_KO_CtpC | -2.535 | -1.392 |
| H37Rv_KO_CtpD | -2.767 | -1.364 |
| H37Rv_KO_Rv1272 | -1.216 | -1.256 |
| H37Rv_KO_SugABC | 0.812 | 0.456 |
| H37Rv_KO_MbtN | -2.355 | -1.836 |
| Trans05 | -1.441 | -2.179 |
| macrophage_unactivated | 0.17 | -0.36 |
| IL1 | 0.264 | 0.789 |
| Rapamycin | -0.473 | -1.522 |
| Tcell | -0.775 | -0.635 |
| GMCSF | 0.496 | -0.459 |
| IFNab | 0.986 | -0.112 |
| IFNg | 0.588 | -0.358 |
| IFNg_GMCSF1 | -1.247 | 0.883 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 2.132 |
| secA2_input | 0.598 | -0.861 |
| delta_Rv3594 | 4.505 | 1.456 |
| delta_Rv3717 | 2.81 | 0.452 |
| delta_Rv3811 | 2.748 | 1.533 |
| delta_Rv0954 | 1.553 | 1.591 |
| PonA1 | 4.464 | 1.08 |
| EccD1_KO | 0.194 | -0.171 |
| EspI_KO | 2.938 | 2.387 |
| PE35_KO | 0.796 | 1.552 |
| PPE68_KO | -0.195 | 0.688 |
| glycerol2 | -1.065 | -2.626 |
| lignocerate | -1.34 | -1.671 |
| oleate | 0.15 | -0.784 |
| phosphatidylcholine | -1.199 | -1.863 |
| acetate | -0.622 | -1.662 |
| glucAc | -2.082 | -2.542 |
| Rv0950ko | 0.874 | 1.517 |
| Rv1096ko | 3.685 | 0.971 |
| Rv3684ko | 0.498 | 1.055 |
| delta_otsA_trehalose | -0.468 | 1.917 |