Top 10 genes with highest correlation to Rv1629/polA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3214/gpm2 | (cc=0.4574) | info on Rv3214/gpm2 |
| Rv1062/- | (cc=0.423) | info on Rv1062/- |
| Rv0539/- | (cc=0.4204) | info on Rv0539/- |
| Rv3606c/folK | (cc=0.4193) | info on Rv3606c/folK |
| Rv2611c/- | (cc=0.4115) | info on Rv2611c/- |
| Rv0051/- | (cc=0.3905) | info on Rv0051/- |
| Rv1170/mshB | (cc=0.3686) | info on Rv1170/mshB |
| Rv3715c/recR | (cc=0.3623) | info on Rv3715c/recR |
| Rv0124/PE_PGRS2 | (cc=0.3603) | info on Rv0124/PE_PGRS2 |
| Rv0060/- | (cc=0.358) | info on Rv0060/- |
Correlation of Rv1629/polA with Rv3214/gpm2
Normalized LFCs for Rv1629/polA:
(description and provenance of datasets)
| Rv1629/polA | Rv3214/gpm2 | |
| Fe_supp_jason_reseq | 0.199 | 0.867 |
| low_pH_jason_reseq | 0.211 | 0.979 |
| NO_jason_reseq | 0.0 | -1.137 |
| B6_jason_reseq | 0.267 | 0.483 |
| MHCII_jason_reseq | 0.123 | -0.612 |
| Isoniazid02 | -0.167 | -1.104 |
| Rifampicin4 | 0.29 | -0.374 |
| Ethambutol3 | 1.835 | 4.243 |
| Meropenem3 | -0.138 | -0.04 |
| Vancomycin16 | 0.284 | -0.088 |
| Rv2680_day32 | -1.042 | 0.82 |
| H37Rv_KO_MarP | -0.662 | 0.246 |
| hypoxia_3wks | -1.196 | -1.878 |
| hypoxia_6wks | 0.355 | -0.311 |
| glycerol | 0.249 | -1.005 |
| cholesterol | 0.734 | 0.435 |
| AJ | 0.771 | -0.151 |
| Bibs02 | -0.55 | -2.015 |
| Bibs02c | 0.132 | -0.608 |
| BL6 | 0.584 | 0.42 |
| BL6a | 0.356 | 0.776 |
| BXD01 | 0.81 | 2.616 |
| BXD010 | 0.23 | 1.134 |
| BXD011 | 0.594 | 1.778 |
| BXD03 | 0.085 | 1.295 |
| BXD04 | 0.813 | 2.487 |
| BXD05 | 0.0 | 1.997 |
| BXD06 | 0.164 | 2.521 |
| BXD07 | 0.171 | 1.939 |
| BXD08 | 0.674 | 2.866 |
| BXD09 | 0.399 | 1.944 |
| CAST | 0.284 | 0.976 |
| CCcont | 0.567 | 0.754 |
| DS01 | 0.0 | -0.838 |
| DS02 | 0.723 | -1.442 |
| DS04 | 1.061 | -1.739 |
| DS0c | 0.506 | -0.456 |
| GP01 | -0.387 | -0.207 |
| GP02 | -0.25 | -0.686 |
| GP0c | 0.607 | 0.742 |
| NOD | -0.314 | 0.07 |
| NZO | 1.571 | 1.121 |
| PWK | 0.352 | -0.652 |
| H37Rv_KO_CtpC | -0.109 | -1.077 |
| H37Rv_KO_CtpD | -0.381 | -0.04 |
| H37Rv_KO_Rv1272 | -0.424 | 0.953 |
| H37Rv_KO_SugABC | -0.138 | 0.399 |
| H37Rv_KO_MbtN | -0.404 | -0.196 |
| Trans05 | -0.512 | 1.705 |
| macrophage_unactivated | 0.609 | -0.281 |
| IL1 | 0.0 | -1.299 |
| Rapamycin | 0.0 | -1.418 |
| Tcell | 0.326 | 0.772 |
| GMCSF | -0.586 | -1.347 |
| IFNab | 0.0 | -1.185 |
| IFNg | -0.286 | 0.307 |
| IFNg_GMCSF1 | -0.336 | -1.376 |
| Rv1432_day32 | 0.139 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.044 |
| secA2_input | 0.322 | -3.572 |
| delta_Rv3594 | 0.193 | 0.746 |
| delta_Rv3717 | 0.438 | 1.616 |
| delta_Rv3811 | 1.282 | 1.666 |
| delta_Rv0954 | 0.0 | -1.213 |
| PonA1 | 1.154 | -0.386 |
| EccD1_KO | -1.059 | -1.845 |
| EspI_KO | -0.285 | -1.403 |
| PE35_KO | -0.292 | -2.824 |
| PPE68_KO | -0.32 | -1.872 |
| glycerol2 | 0.13 | -1.033 |
| lignocerate | 0.22 | -1.038 |
| oleate | -0.457 | -1.65 |
| phosphatidylcholine | 0.0 | -1.63 |
| acetate | 0.567 | 1.368 |
| glucAc | 0.701 | 0.864 |
| Rv0950ko | -0.323 | -0.332 |
| Rv1096ko | 0.302 | 0.651 |
| Rv3684ko | 0.632 | 1.916 |
| delta_otsA_trehalose | -0.254 | 0.466 |