Top 10 genes with highest correlation to Rv1615/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3525c/- | (cc=0.4581) | info on Rv3525c/- |
| Rv2274c/mazF8 | (cc=0.4461) | info on Rv2274c/mazF8 |
| Rv1048c/- | (cc=0.4253) | info on Rv1048c/- |
| Rv2585c/- | (cc=0.4206) | info on Rv2585c/- |
| Rv0923c/- | (cc=0.4176) | info on Rv0923c/- |
| Rv2269c/- | (cc=0.396) | info on Rv2269c/- |
| Rv0826/- | (cc=0.395) | info on Rv0826/- |
| Rv2061c/- | (cc=0.3931) | info on Rv2061c/- |
| Rv1528c/papA4 | (cc=0.3769) | info on Rv1528c/papA4 |
| Rv2811/- | (cc=0.3754) | info on Rv2811/- |
Correlation of Rv1615/- with Rv0826/-
Normalized LFCs for Rv1615/-:
(description and provenance of datasets)
| Rv1615/- | Rv0826/- | |
| Fe_supp_jason_reseq | -3.429 | -0.48 |
| low_pH_jason_reseq | -1.571 | -1.4 |
| NO_jason_reseq | -0.732 | 0.845 |
| B6_jason_reseq | -0.432 | 0.127 |
| MHCII_jason_reseq | -0.675 | 0.272 |
| Isoniazid02 | -1.809 | 0.013 |
| Rifampicin4 | 1.224 | -0.168 |
| Ethambutol3 | -0.737 | -0.011 |
| Meropenem3 | -0.183 | 0.061 |
| Vancomycin16 | -0.146 | -0.154 |
| Rv2680_day32 | -0.463 | 1.381 |
| H37Rv_KO_MarP | -1.29 | 0.161 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | -0.094 | 0.038 |
| glycerol | -0.41 | -0.696 |
| cholesterol | -0.745 | -0.232 |
| AJ | 0.123 | 0.35 |
| Bibs02 | 1.048 | 0.339 |
| Bibs02c | -0.452 | -0.118 |
| BL6 | -0.689 | 0.35 |
| BL6a | -0.376 | -0.267 |
| BXD01 | 0.395 | 0.556 |
| BXD010 | -0.392 | 0.217 |
| BXD011 | -0.929 | -0.054 |
| BXD03 | 0.185 | -0.116 |
| BXD04 | 1.351 | 0.293 |
| BXD05 | -0.122 | 0.171 |
| BXD06 | -0.051 | 0.29 |
| BXD07 | -0.712 | -0.027 |
| BXD08 | 0.07 | 0.383 |
| BXD09 | -0.626 | -0.039 |
| CAST | 0.325 | 0.075 |
| CCcont | -0.617 | -0.029 |
| DS01 | -0.2 | 0.222 |
| DS02 | -0.603 | 0.348 |
| DS04 | 0.557 | 0.631 |
| DS0c | -0.036 | -0.104 |
| GP01 | -1.394 | 0.061 |
| GP02 | -1.711 | 0.156 |
| GP0c | -1.479 | -0.147 |
| NOD | 0.69 | -0.037 |
| NZO | 0.301 | 0.538 |
| PWK | 0.997 | 0.585 |
| H37Rv_KO_CtpC | -0.864 | 0.112 |
| H37Rv_KO_CtpD | -2.051 | -0.155 |
| H37Rv_KO_Rv1272 | -0.103 | 0.09 |
| H37Rv_KO_SugABC | -1.767 | 0.121 |
| H37Rv_KO_MbtN | 0.555 | 0.803 |
| Trans05 | 0.757 | 0.704 |
| macrophage_unactivated | 1.095 | 0.388 |
| IL1 | -0.326 | -0.071 |
| Rapamycin | -0.374 | -0.316 |
| Tcell | -0.248 | 0.3 |
| GMCSF | 0.642 | 0.335 |
| IFNab | -0.402 | -0.532 |
| IFNg | -0.056 | 0.126 |
| IFNg_GMCSF1 | 1.09 | 0.902 |
| Rv1432_day32 | 1.197 | 1.446 |
| Rv1565c_day32 | -0.136 | 0.074 |
| secA2_input | -0.7 | 0.404 |
| delta_Rv3594 | 0.0 | 0.119 |
| delta_Rv3717 | -0.112 | 0.554 |
| delta_Rv3811 | -0.192 | 0.306 |
| delta_Rv0954 | -0.238 | 0.328 |
| PonA1 | -0.763 | -0.304 |
| EccD1_KO | -0.724 | -0.257 |
| EspI_KO | 0.476 | 0.536 |
| PE35_KO | 0.041 | -0.615 |
| PPE68_KO | 0.253 | -0.656 |
| glycerol2 | -0.747 | -0.015 |
| lignocerate | -1.068 | 0.179 |
| oleate | 0.739 | 0.213 |
| phosphatidylcholine | -0.409 | 0.262 |
| acetate | -0.904 | -0.025 |
| glucAc | -1.654 | -0.139 |
| Rv0950ko | -0.787 | 0.51 |
| Rv1096ko | -0.618 | 0.73 |
| Rv3684ko | -0.495 | 1.035 |
| delta_otsA_trehalose | -0.773 | -0.544 |