Top 10 genes with highest correlation to Rv1591/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3273/- | (cc=0.553) | info on Rv3273/- |
| Rv0099/fadD10 | (cc=0.4461) | info on Rv0099/fadD10 |
| Rv2052c/- | (cc=0.4425) | info on Rv2052c/- |
| Rv0960/vapC9 | (cc=0.4419) | info on Rv0960/vapC9 |
| Rv2590/fadD9 | (cc=0.4411) | info on Rv2590/fadD9 |
| Rv0101/nrp | (cc=0.4315) | info on Rv0101/nrp |
| Rv1000c/- | (cc=0.4289) | info on Rv1000c/- |
| Rv1808/PPE32 | (cc=0.4252) | info on Rv1808/PPE32 |
| Rv0381c/- | (cc=0.4197) | info on Rv0381c/- |
| Rv2073c/- | (cc=0.4163) | info on Rv2073c/- |
Correlation of Rv1591/- with Rv3273/-
Normalized LFCs for Rv1591/-:
(description and provenance of datasets)
| Rv1591/- | Rv3273/- | |
| Fe_supp_jason_reseq | -0.687 | -1.46 |
| low_pH_jason_reseq | -1.658 | -1.335 |
| NO_jason_reseq | -0.478 | -1.924 |
| B6_jason_reseq | -1.129 | -1.095 |
| MHCII_jason_reseq | -0.549 | -0.165 |
| Isoniazid02 | -0.242 | 0.899 |
| Rifampicin4 | -0.43 | -0.774 |
| Ethambutol3 | 0.484 | 0.151 |
| Meropenem3 | 0.165 | 0.149 |
| Vancomycin16 | -0.188 | -0.488 |
| Rv2680_day32 | -1.322 | -0.251 |
| H37Rv_KO_MarP | -0.765 | 0.195 |
| hypoxia_3wks | 0.498 | 0.945 |
| hypoxia_6wks | 0.791 | 0.309 |
| glycerol | 0.124 | -0.927 |
| cholesterol | 0.022 | 0.208 |
| AJ | 0.069 | -1.309 |
| Bibs02 | 1.017 | 0.658 |
| Bibs02c | 0.221 | 0.855 |
| BL6 | -0.05 | 0.522 |
| BL6a | -0.011 | 0.263 |
| BXD01 | -0.987 | -0.902 |
| BXD010 | -0.799 | -0.723 |
| BXD011 | -0.65 | 0.008 |
| BXD03 | -0.786 | -0.543 |
| BXD04 | -0.945 | -0.739 |
| BXD05 | -0.401 | -0.454 |
| BXD06 | -0.855 | -0.37 |
| BXD07 | -0.783 | -0.721 |
| BXD08 | -0.179 | -0.972 |
| BXD09 | -0.611 | -0.378 |
| CAST | -1.108 | -1.625 |
| CCcont | -0.569 | -0.183 |
| DS01 | 0.25 | 0.636 |
| DS02 | 0.236 | 0.712 |
| DS04 | 0.146 | 0.037 |
| DS0c | 0.673 | 0.721 |
| GP01 | -0.649 | -0.172 |
| GP02 | -0.109 | -0.687 |
| GP0c | -0.797 | -0.547 |
| NOD | -1.352 | -0.46 |
| NZO | -0.485 | -1.332 |
| PWK | -0.782 | -1.591 |
| H37Rv_KO_CtpC | -0.51 | -0.064 |
| H37Rv_KO_CtpD | 0.742 | 0.217 |
| H37Rv_KO_Rv1272 | 0.403 | -0.579 |
| H37Rv_KO_SugABC | 1.099 | -0.465 |
| H37Rv_KO_MbtN | 0.694 | -0.164 |
| Trans05 | -0.556 | -0.858 |
| macrophage_unactivated | 0.436 | -0.183 |
| IL1 | 0.73 | 1.679 |
| Rapamycin | 0.73 | 1.062 |
| Tcell | 0.189 | -0.746 |
| GMCSF | 0.504 | 0.597 |
| IFNab | 0.2 | 0.662 |
| IFNg | 0.468 | 1.497 |
| IFNg_GMCSF1 | 0.82 | 0.368 |
| Rv1432_day32 | 0.408 | -0.063 |
| Rv1565c_day32 | -2.72 | -1.677 |
| secA2_input | -0.144 | -0.213 |
| delta_Rv3594 | -1.135 | -0.875 |
| delta_Rv3717 | -0.618 | -0.471 |
| delta_Rv3811 | -0.544 | -0.344 |
| delta_Rv0954 | -0.473 | -0.976 |
| PonA1 | 0.235 | -0.185 |
| EccD1_KO | 0.016 | -0.707 |
| EspI_KO | 0.385 | -0.65 |
| PE35_KO | -0.053 | -0.98 |
| PPE68_KO | 0.406 | -0.486 |
| glycerol2 | -0.465 | 1.386 |
| lignocerate | -0.273 | -0.935 |
| oleate | -1.129 | -3.077 |
| phosphatidylcholine | -0.059 | 0.973 |
| acetate | -0.59 | 0.482 |
| glucAc | -0.367 | 0.24 |
| Rv0950ko | 0.437 | -0.488 |
| Rv1096ko | 0.597 | -0.118 |
| Rv3684ko | -0.311 | -0.819 |
| delta_otsA_trehalose | -0.578 | -0.382 |