Top 10 genes with highest correlation to Rv1585c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0305c/PPE6 | (cc=0.5774) | info on Rv0305c/PPE6 |
| Rv3595c/PE_PGRS59 | (cc=0.5115) | info on Rv3595c/PE_PGRS59 |
| Rv1061/- | (cc=0.4846) | info on Rv1061/- |
| Rv0074/- | (cc=0.4725) | info on Rv0074/- |
| Rv2338c/moeW | (cc=0.4641) | info on Rv2338c/moeW |
| Rv0554/bpoC | (cc=0.4587) | info on Rv0554/bpoC |
| Rv3517/- | (cc=0.4422) | info on Rv3517/- |
| Rv2795c/- | (cc=0.4407) | info on Rv2795c/- |
| Rv1509/- | (cc=0.4363) | info on Rv1509/- |
| Rv3142c/- | (cc=0.436) | info on Rv3142c/- |
Correlation of Rv1585c/- with Rv0554/bpoC
Normalized LFCs for Rv1585c/-:
(description and provenance of datasets)
| Rv1585c/- | Rv0554/bpoC | |
| Fe_supp_jason_reseq | 1.121 | -0.069 |
| low_pH_jason_reseq | 0.169 | 2.332 |
| NO_jason_reseq | 0.391 | 1.457 |
| B6_jason_reseq | -0.723 | 1.771 |
| MHCII_jason_reseq | -0.485 | -2.262 |
| Isoniazid02 | 0.131 | 0.055 |
| Rifampicin4 | 0.796 | -0.382 |
| Ethambutol3 | -0.117 | -0.212 |
| Meropenem3 | 1.022 | 0.506 |
| Vancomycin16 | 0.878 | 0.844 |
| Rv2680_day32 | 0.249 | -1.682 |
| H37Rv_KO_MarP | 0.127 | 1.099 |
| hypoxia_3wks | -0.235 | -4.506 |
| hypoxia_6wks | -0.526 | -4.803 |
| glycerol | -0.809 | 1.349 |
| cholesterol | 0.193 | 1.172 |
| AJ | 0.983 | 1.54 |
| Bibs02 | -1.507 | -2.311 |
| Bibs02c | -0.102 | -2.501 |
| BL6 | 0.569 | -0.478 |
| BL6a | 0.092 | -0.375 |
| BXD01 | 0.278 | 0.563 |
| BXD010 | -0.345 | -0.21 |
| BXD011 | -0.51 | -0.697 |
| BXD03 | 1.103 | -0.924 |
| BXD04 | -0.495 | -0.73 |
| BXD05 | 1.934 | -0.338 |
| BXD06 | 0.122 | 0.382 |
| BXD07 | -0.138 | -0.581 |
| BXD08 | 0.994 | -0.258 |
| BXD09 | -0.216 | -0.369 |
| CAST | -0.112 | 1.758 |
| CCcont | 0.069 | -0.784 |
| DS01 | 0.683 | 0.756 |
| DS02 | 0.629 | 1.07 |
| DS04 | 0.696 | 0.446 |
| DS0c | -0.333 | 0.355 |
| GP01 | -0.625 | -2.41 |
| GP02 | -0.393 | -2.107 |
| GP0c | 0.911 | -3.812 |
| NOD | 2.94 | 1.622 |
| NZO | -1.097 | 1.36 |
| PWK | 0.494 | 0.234 |
| H37Rv_KO_CtpC | 2.372 | 1.234 |
| H37Rv_KO_CtpD | 3.324 | 0.128 |
| H37Rv_KO_Rv1272 | 1.597 | -0.317 |
| H37Rv_KO_SugABC | 1.362 | -0.823 |
| H37Rv_KO_MbtN | 0.644 | -1.683 |
| Trans05 | 0.423 | -0.771 |
| macrophage_unactivated | 2.547 | 1.026 |
| IL1 | -1.231 | -1.661 |
| Rapamycin | -0.921 | -2.194 |
| Tcell | 0.554 | 3.891 |
| GMCSF | 0.0 | -4.906 |
| IFNab | -1.255 | -6.0 |
| IFNg | -1.109 | -4.105 |
| IFNg_GMCSF1 | 1.012 | -1.049 |
| Rv1432_day32 | 0.0 | -1.813 |
| Rv1565c_day32 | 0.455 | 0.248 |
| secA2_input | -1.077 | -0.158 |
| delta_Rv3594 | -2.071 | -4.812 |
| delta_Rv3717 | -1.396 | -4.394 |
| delta_Rv3811 | -1.456 | -4.921 |
| delta_Rv0954 | -0.677 | -2.084 |
| PonA1 | -0.503 | -0.771 |
| EccD1_KO | 0.125 | 0.697 |
| EspI_KO | -1.001 | 1.107 |
| PE35_KO | -0.117 | 0.753 |
| PPE68_KO | 0.8 | 0.461 |
| glycerol2 | -0.161 | -0.356 |
| lignocerate | -0.375 | 0.041 |
| oleate | 0.152 | 0.22 |
| phosphatidylcholine | 0.15 | 0.207 |
| acetate | 0.263 | 0.432 |
| glucAc | 0.485 | 0.168 |
| Rv0950ko | 1.839 | 1.556 |
| Rv1096ko | 0.332 | 0.847 |
| Rv3684ko | 0.904 | 2.515 |
| delta_otsA_trehalose | 0.039 | 0.165 |