Top 10 genes with highest correlation to Rv1554/frdC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2266/cyp124 | (cc=0.5296) | info on Rv2266/cyp124 |
| Rv2780/ald | (cc=0.516) | info on Rv2780/ald |
| Rv2270/lppN | (cc=0.5063) | info on Rv2270/lppN |
| Rv3189/- | (cc=0.4999) | info on Rv3189/- |
| Rv2169c/- | (cc=0.497) | info on Rv2169c/- |
| Rv1101c/- | (cc=0.4946) | info on Rv1101c/- |
| Rv2290/lppO | (cc=0.4935) | info on Rv2290/lppO |
| Rv2083/- | (cc=0.4867) | info on Rv2083/- |
| Rv1399c/nlhH | (cc=0.4826) | info on Rv1399c/nlhH |
| Rv2847c/cysG | (cc=0.4808) | info on Rv2847c/cysG |
Correlation of Rv1554/frdC with Rv2270/lppN
Normalized LFCs for Rv1554/frdC:
(description and provenance of datasets)
| Rv1554/frdC | Rv2270/lppN | |
| Fe_supp_jason_reseq | -0.125 | 0.71 |
| low_pH_jason_reseq | 0.497 | -0.323 |
| NO_jason_reseq | -0.333 | -0.318 |
| B6_jason_reseq | 1.17 | 0.63 |
| MHCII_jason_reseq | 0.359 | -0.077 |
| Isoniazid02 | 0.054 | -0.26 |
| Rifampicin4 | 0.328 | 0.401 |
| Ethambutol3 | 0.139 | -0.185 |
| Meropenem3 | -0.158 | 0.398 |
| Vancomycin16 | -0.244 | 0.096 |
| Rv2680_day32 | 0.035 | 0.184 |
| H37Rv_KO_MarP | 0.377 | 0.459 |
| hypoxia_3wks | 0.977 | -0.315 |
| hypoxia_6wks | 1.472 | -0.031 |
| glycerol | 0.187 | 0.553 |
| cholesterol | 0.847 | -0.164 |
| AJ | -0.071 | -0.629 |
| Bibs02 | 0.522 | -1.25 |
| Bibs02c | 0.5 | 0.638 |
| BL6 | -0.352 | -1.299 |
| BL6a | 0.643 | -0.033 |
| BXD01 | 0.13 | -0.933 |
| BXD010 | 0.88 | 0.595 |
| BXD011 | 0.297 | 0.081 |
| BXD03 | -0.195 | -1.289 |
| BXD04 | 0.212 | -0.581 |
| BXD05 | 0.648 | 0.086 |
| BXD06 | 0.271 | -0.435 |
| BXD07 | 0.442 | -0.222 |
| BXD08 | 1.1 | -0.931 |
| BXD09 | 0.546 | -0.184 |
| CAST | 0.0 | -0.324 |
| CCcont | -0.376 | -1.924 |
| DS01 | 0.977 | -0.058 |
| DS02 | 0.682 | -0.246 |
| DS04 | 0.308 | -0.505 |
| DS0c | 0.908 | -0.284 |
| GP01 | 0.888 | -0.614 |
| GP02 | 0.49 | -0.102 |
| GP0c | -0.328 | -0.734 |
| NOD | 0.099 | 0.805 |
| NZO | 0.733 | -0.964 |
| PWK | 0.571 | 0.033 |
| H37Rv_KO_CtpC | 0.173 | 0.104 |
| H37Rv_KO_CtpD | 1.074 | -0.251 |
| H37Rv_KO_Rv1272 | 0.957 | 0.998 |
| H37Rv_KO_SugABC | 0.243 | 0.159 |
| H37Rv_KO_MbtN | 0.13 | -0.597 |
| Trans05 | 1.146 | 0.103 |
| macrophage_unactivated | 0.758 | -0.376 |
| IL1 | 0.534 | 0.273 |
| Rapamycin | 0.552 | -0.761 |
| Tcell | 0.274 | -0.124 |
| GMCSF | 0.246 | -0.597 |
| IFNab | 0.378 | -0.057 |
| IFNg | 0.5 | 0.43 |
| IFNg_GMCSF1 | 0.729 | 0.346 |
| Rv1432_day32 | 0.789 | 0.621 |
| Rv1565c_day32 | 0.809 | -1.199 |
| secA2_input | -1.088 | -1.276 |
| delta_Rv3594 | 0.837 | 1.115 |
| delta_Rv3717 | 0.59 | 0.203 |
| delta_Rv3811 | -0.042 | 1.715 |
| delta_Rv0954 | 0.372 | 0.048 |
| PonA1 | 0.182 | -0.235 |
| EccD1_KO | 1.95 | 1.579 |
| EspI_KO | 0.625 | 1.845 |
| PE35_KO | 1.301 | 3.106 |
| PPE68_KO | 0.966 | 3.318 |
| glycerol2 | -0.343 | -1.544 |
| lignocerate | -0.446 | -2.176 |
| oleate | -0.121 | -1.198 |
| phosphatidylcholine | -0.381 | -1.751 |
| acetate | -0.56 | -2.622 |
| glucAc | -0.739 | -2.001 |
| Rv0950ko | 0.256 | 0.464 |
| Rv1096ko | -0.799 | -0.341 |
| Rv3684ko | -0.982 | -0.144 |
| delta_otsA_trehalose | 0.076 | 0.272 |