Top 10 genes with highest correlation to Rv1425/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3510c/- | (cc=0.5358) | info on Rv3510c/- |
| Rv0264c/- | (cc=0.5195) | info on Rv0264c/- |
| Rv3395A/- | (cc=0.5179) | info on Rv3395A/- |
| Rv0261c/narK3 | (cc=0.5177) | info on Rv0261c/narK3 |
| Rv2351c/plcA | (cc=0.5098) | info on Rv2351c/plcA |
| Rv3705A/- | (cc=0.5096) | info on Rv3705A/- |
| Rv1927/- | (cc=0.5068) | info on Rv1927/- |
| Rv2405/- | (cc=0.4925) | info on Rv2405/- |
| Rv0278c/PE_PGRS3 | (cc=0.4899) | info on Rv0278c/PE_PGRS3 |
| Rv0267/narU | (cc=0.4882) | info on Rv0267/narU |
Correlation of Rv1425/- with Rv3510c/-
Normalized LFCs for Rv1425/-:
(description and provenance of datasets)
| Rv1425/- | Rv3510c/- | |
| Fe_supp_jason_reseq | 0.054 | 0.425 |
| low_pH_jason_reseq | -0.119 | -1.101 |
| NO_jason_reseq | -0.168 | -0.192 |
| B6_jason_reseq | 0.634 | 0.014 |
| MHCII_jason_reseq | 0.73 | 0.622 |
| Isoniazid02 | 1.234 | 1.046 |
| Rifampicin4 | -0.087 | -0.506 |
| Ethambutol3 | 0.061 | -0.306 |
| Meropenem3 | 0.817 | 1.143 |
| Vancomycin16 | 0.085 | -0.271 |
| Rv2680_day32 | 0.043 | -0.028 |
| H37Rv_KO_MarP | 0.236 | -0.056 |
| hypoxia_3wks | -0.263 | -0.144 |
| hypoxia_6wks | -0.56 | -0.299 |
| glycerol | -0.591 | -1.597 |
| cholesterol | 0.012 | -0.532 |
| AJ | 0.123 | 0.124 |
| Bibs02 | -0.11 | -0.384 |
| Bibs02c | -0.27 | 0.138 |
| BL6 | -0.246 | 0.141 |
| BL6a | -0.775 | 0.154 |
| BXD01 | 0.297 | -0.269 |
| BXD010 | -0.432 | 0.017 |
| BXD011 | -0.176 | -0.34 |
| BXD03 | -0.488 | -0.395 |
| BXD04 | 0.021 | -0.864 |
| BXD05 | -0.328 | -0.031 |
| BXD06 | 0.039 | -0.566 |
| BXD07 | -0.152 | -0.238 |
| BXD08 | 0.163 | -0.513 |
| BXD09 | -0.395 | -0.679 |
| CAST | -0.489 | -0.169 |
| CCcont | -0.25 | -0.151 |
| DS01 | 0.05 | -0.571 |
| DS02 | 0.46 | -0.043 |
| DS04 | 0.416 | -0.11 |
| DS0c | 0.09 | 0.207 |
| GP01 | -0.038 | -0.561 |
| GP02 | 1.025 | 0.027 |
| GP0c | -0.199 | -0.754 |
| NOD | 0.163 | 0.286 |
| NZO | 0.295 | 0.381 |
| PWK | 0.276 | 0.426 |
| H37Rv_KO_CtpC | -0.328 | -0.604 |
| H37Rv_KO_CtpD | 0.169 | -0.72 |
| H37Rv_KO_Rv1272 | 0.747 | -0.512 |
| H37Rv_KO_SugABC | -0.2 | 0.378 |
| H37Rv_KO_MbtN | -0.224 | 0.166 |
| Trans05 | 0.532 | -0.398 |
| macrophage_unactivated | -0.107 | -0.805 |
| IL1 | -0.05 | -0.495 |
| Rapamycin | 0.276 | 0.132 |
| Tcell | -0.14 | -0.446 |
| GMCSF | 0.045 | -0.283 |
| IFNab | -0.348 | 0.033 |
| IFNg | -0.233 | 0.388 |
| IFNg_GMCSF1 | -0.135 | -0.317 |
| Rv1432_day32 | 0.0 | 1.026 |
| Rv1565c_day32 | 0.377 | 0.51 |
| secA2_input | -0.027 | 0.379 |
| delta_Rv3594 | -0.119 | -0.855 |
| delta_Rv3717 | -0.395 | 0.213 |
| delta_Rv3811 | -0.412 | -0.555 |
| delta_Rv0954 | 0.58 | 1.012 |
| PonA1 | -0.488 | -0.08 |
| EccD1_KO | -0.526 | 0.089 |
| EspI_KO | -0.753 | -1.195 |
| PE35_KO | -0.312 | -0.265 |
| PPE68_KO | -1.008 | -0.522 |
| glycerol2 | 0.996 | 1.006 |
| lignocerate | 1.223 | 1.048 |
| oleate | 0.896 | 0.52 |
| phosphatidylcholine | 1.389 | 0.878 |
| acetate | 0.68 | 0.532 |
| glucAc | 0.474 | 0.359 |
| Rv0950ko | -0.277 | -0.024 |
| Rv1096ko | -0.229 | 0.519 |
| Rv3684ko | -0.098 | 0.586 |
| delta_otsA_trehalose | -0.628 | 0.07 |