Top 10 genes with highest correlation to Rv1413/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1726/- | (cc=0.5321) | info on Rv1726/- |
| Rv3903c/- | (cc=0.4719) | info on Rv3903c/- |
| Rv0731c/- | (cc=0.4713) | info on Rv0731c/- |
| Rv0443/- | (cc=0.4621) | info on Rv0443/- |
| Rv0317c/glpQ2 | (cc=0.4563) | info on Rv0317c/glpQ2 |
| Rv1232c/- | (cc=0.4506) | info on Rv1232c/- |
| Rv3742c/- | (cc=0.4364) | info on Rv3742c/- |
| Rv0551c/fadD8 | (cc=0.4239) | info on Rv0551c/fadD8 |
| Rv0672/fadE8 | (cc=0.4161) | info on Rv0672/fadE8 |
| Rv1584c/- | (cc=0.4115) | info on Rv1584c/- |
Correlation of Rv1413/- with Rv3742c/-
Normalized LFCs for Rv1413/-:
(description and provenance of datasets)
| Rv1413/- | Rv3742c/- | |
| Fe_supp_jason_reseq | -0.5 | 0.702 |
| low_pH_jason_reseq | -1.4 | -0.606 |
| NO_jason_reseq | 0.58 | -0.879 |
| B6_jason_reseq | -0.617 | 0.213 |
| MHCII_jason_reseq | -0.25 | -0.14 |
| Isoniazid02 | -0.444 | -2.023 |
| Rifampicin4 | -0.143 | -0.414 |
| Ethambutol3 | -1.063 | -0.238 |
| Meropenem3 | -1.623 | -0.773 |
| Vancomycin16 | -0.825 | -1.061 |
| Rv2680_day32 | -1.976 | -0.87 |
| H37Rv_KO_MarP | -0.11 | 0.188 |
| hypoxia_3wks | 0.255 | 0.128 |
| hypoxia_6wks | 0.142 | -0.484 |
| glycerol | 0.322 | -0.74 |
| cholesterol | 0.44 | 0.085 |
| AJ | 0.176 | -0.526 |
| Bibs02 | -0.14 | -0.158 |
| Bibs02c | -0.955 | -0.385 |
| BL6 | 0.072 | 0.53 |
| BL6a | -0.794 | 0.436 |
| BXD01 | -0.471 | -0.144 |
| BXD010 | -0.324 | 0.911 |
| BXD011 | -0.942 | 0.708 |
| BXD03 | -0.928 | 0.651 |
| BXD04 | -0.134 | -0.073 |
| BXD05 | -0.64 | 0.482 |
| BXD06 | -0.469 | 0.307 |
| BXD07 | -0.307 | 0.467 |
| BXD08 | -0.134 | 0.644 |
| BXD09 | -0.62 | 0.295 |
| CAST | -0.354 | 0.115 |
| CCcont | -0.609 | 0.242 |
| DS01 | 0.291 | 0.051 |
| DS02 | 0.37 | 0.262 |
| DS04 | 0.285 | 1.092 |
| DS0c | 0.119 | -0.049 |
| GP01 | -0.271 | 1.204 |
| GP02 | 1.519 | 0.907 |
| GP0c | -0.712 | 0.655 |
| NOD | -1.487 | -1.025 |
| NZO | -0.341 | -0.66 |
| PWK | -0.24 | -0.051 |
| H37Rv_KO_CtpC | 0.071 | 1.132 |
| H37Rv_KO_CtpD | -0.308 | 1.341 |
| H37Rv_KO_Rv1272 | -1.007 | 1.592 |
| H37Rv_KO_SugABC | 1.282 | 1.254 |
| H37Rv_KO_MbtN | 1.403 | 0.419 |
| Trans05 | -0.359 | 0.72 |
| macrophage_unactivated | -0.6 | -0.085 |
| IL1 | -0.682 | -0.113 |
| Rapamycin | 0.66 | -0.021 |
| Tcell | -0.049 | -0.283 |
| GMCSF | -0.486 | -0.269 |
| IFNab | -0.423 | -0.021 |
| IFNg | 0.243 | -0.331 |
| IFNg_GMCSF1 | -0.405 | 0.955 |
| Rv1432_day32 | -0.927 | -0.386 |
| Rv1565c_day32 | -1.99 | 0.738 |
| secA2_input | -0.019 | -0.193 |
| delta_Rv3594 | 0.288 | -0.463 |
| delta_Rv3717 | 0.057 | 0.141 |
| delta_Rv3811 | -0.51 | 0.019 |
| delta_Rv0954 | 0.063 | 0.72 |
| PonA1 | -0.137 | 0.904 |
| EccD1_KO | -0.25 | -0.457 |
| EspI_KO | -0.476 | -0.405 |
| PE35_KO | -0.473 | -0.3 |
| PPE68_KO | -0.23 | -0.454 |
| glycerol2 | 0.265 | 0.397 |
| lignocerate | 0.625 | 0.55 |
| oleate | -0.267 | 0.052 |
| phosphatidylcholine | 0.143 | 0.331 |
| acetate | -0.12 | 0.052 |
| glucAc | 0.182 | 0.26 |
| Rv0950ko | 0.28 | 0.742 |
| Rv1096ko | -0.763 | 0.6 |
| Rv3684ko | 0.082 | 0.586 |
| delta_otsA_trehalose | 3.435 | 3.512 |