TnSeqCorr

Top 10 genes with highest correlation to Rv1406/fmt:

update plotcorrelationlink to info on gene
Rv3671c/- (cc=0.7245) info on Rv3671c/-
Rv2392/cysH (cc=0.6574) info on Rv2392/cysH
Rv3101c/ftsX (cc=0.5706) info on Rv3101c/ftsX
Rv2439c/proB (cc=0.5567) info on Rv2439c/proB
Rv0811c/- (cc=0.5484) info on Rv0811c/-
Rv3258c/- (cc=0.5471) info on Rv3258c/-
Rv3789/- (cc=0.5139) info on Rv3789/-
Rv2229c/- (cc=0.4912) info on Rv2229c/-
Rv3670/ephE (cc=0.4553) info on Rv3670/ephE
Rv0736/rslA (cc=0.4406) info on Rv0736/rslA

Correlation of Rv1406/fmt with Rv2439c/proB

Normalized LFCs for Rv1406/fmt:
(description and provenance of datasets)
Rv1406/fmtRv2439c/proB
Fe_supp_jason_reseq

0.0

-0.766

low_pH_jason_reseq

0.231

-0.811

NO_jason_reseq

0.0

-0.914

B6_jason_reseq

0.0

-0.538

MHCII_jason_reseq

0.0

-0.474

Isoniazid02

0.0

0.0

Rifampicin4

0.0

0.0

Ethambutol3

0.0

0.0

Meropenem3

0.0

0.0

Vancomycin16

0.0

0.0

Rv2680_day32

0.0

0.0

H37Rv_KO_MarP

-1.197

-0.684

hypoxia_3wks

0.0

0.0

hypoxia_6wks

0.0

0.0

glycerol

0.0

0.0

cholesterol

0.0

0.0

AJ

0.0

0.0

Bibs02

0.0

0.0

Bibs02c

0.0

0.0

BL6

0.0

0.0

BL6a

0.0

0.0

BXD01

0.0

0.0

BXD010

0.0

0.0

BXD011

0.127

0.0

BXD03

0.0

0.0

BXD04

0.0

0.0

BXD05

0.0

0.0

BXD06

0.0

0.0

BXD07

0.0

0.0

BXD08

0.0

0.0

BXD09

0.0

0.0

CAST

0.0

0.0

CCcont

0.0

0.0

DS01

0.0

0.0

DS02

0.0

0.0

DS04

0.0

0.194

DS0c

0.0

0.0

GP01

0.0

0.0

GP02

0.0

0.0

GP0c

0.0

0.0

NOD

0.0

0.0

NZO

0.0

0.0

PWK

0.0

0.0

H37Rv_KO_CtpC

0.0

0.0

H37Rv_KO_CtpD

0.0

0.0

H37Rv_KO_Rv1272

0.0

0.0

H37Rv_KO_SugABC

0.0

0.099

H37Rv_KO_MbtN

0.0

0.0

Trans05

0.0

0.0

macrophage_unactivated

0.0

0.0

IL1

0.0

0.0

Rapamycin

0.0

0.0

Tcell

0.0

0.0

GMCSF

0.0

0.0

IFNab

0.0

0.0

IFNg

0.0

0.0

IFNg_GMCSF1

0.0

0.0

Rv1432_day32

0.0

0.0

Rv1565c_day32

0.0

0.0

secA2_input

0.216

0.0

delta_Rv3594

0.315

0.0

delta_Rv3717

-0.477

0.0

delta_Rv3811

0.446

0.87

delta_Rv0954

-0.149

0.0

PonA1

-0.437

0.0

EccD1_KO

-0.378

0.0

EspI_KO

-0.687

0.0

PE35_KO

-0.335

0.0

PPE68_KO

0.0

0.0

glycerol2

0.0

0.0

lignocerate

0.0

0.0

oleate

0.0

0.0

phosphatidylcholine

0.0

0.0

acetate

0.0

0.0

glucAc

0.0

0.0

Rv0950ko

-0.416

0.0

Rv1096ko

1.632

0.416

Rv3684ko

1.464

1.588

delta_otsA_trehalose

0.0

0.0