TnSeqCorr

Top 10 genes with highest correlation to Rv1367c/-:

update plotcorrelationlink to info on gene
Rv3354/- (cc=0.6705) info on Rv3354/-
Rv3056/dinP (cc=0.6547) info on Rv3056/dinP
Rv2559c/- (cc=0.646) info on Rv2559c/-
Rv2424c/- (cc=0.5961) info on Rv2424c/-
Rv1089/PE10 (cc=0.5889) info on Rv1089/PE10
Rv1070c/echA8 (cc=0.5883) info on Rv1070c/echA8
Rv2633c/- (cc=0.5814) info on Rv2633c/-
Rv1735c/- (cc=0.5791) info on Rv1735c/-
Rv3295/- (cc=0.5766) info on Rv3295/-
Rv0428c/- (cc=0.5674) info on Rv0428c/-

Correlation of Rv1367c/- with Rv1089/PE10

Normalized LFCs for Rv1367c/-:
(description and provenance of datasets)
Rv1367c/-Rv1089/PE10
Fe_supp_jason_reseq

-0.668

2.729

low_pH_jason_reseq

-0.621

-1.549

NO_jason_reseq

0.102

1.467

B6_jason_reseq

0.32

1.672

MHCII_jason_reseq

0.499

2.369

Isoniazid02

0.322

0.53

Rifampicin4

0.574

1.633

Ethambutol3

1.446

3.017

Meropenem3

0.0

1.224

Vancomycin16

0.265

0.727

Rv2680_day32

-0.364

-0.131

H37Rv_KO_MarP

0.176

1.531

hypoxia_3wks

0.136

-0.407

hypoxia_6wks

-0.438

-1.585

glycerol

-0.073

2.092

cholesterol

-0.132

-0.197

AJ

-0.314

1.782

Bibs02

-0.845

1.062

Bibs02c

-0.4

0.433

BL6

-1.556

-2.751

BL6a

-0.476

-0.682

BXD01

-0.868

-1.73

BXD010

-0.751

-1.438

BXD011

-0.447

-0.659

BXD03

-1.169

-1.087

BXD04

-0.891

-0.864

BXD05

-0.533

0.236

BXD06

-0.746

-1.403

BXD07

-0.944

-2.116

BXD08

-0.416

-1.596

BXD09

-1.607

-1.091

CAST

-0.624

0.617

CCcont

-1.029

-1.854

DS01

-0.156

-0.498

DS02

-0.044

-1.218

DS04

-0.094

0.614

DS0c

0.035

0.938

GP01

-0.481

1.922

GP02

0.1

0.613

GP0c

-0.119

2.39

NOD

0.026

-1.57

NZO

0.329

1.445

PWK

-0.655

0.19

H37Rv_KO_CtpC

0.075

-0.268

H37Rv_KO_CtpD

-0.046

0.315

H37Rv_KO_Rv1272

-0.075

-2.007

H37Rv_KO_SugABC

-0.189

-1.076

H37Rv_KO_MbtN

-1.426

-0.43

Trans05

0.417

-0.236

macrophage_unactivated

-0.789

-1.424

IL1

-0.875

-0.676

Rapamycin

-1.154

-2.756

Tcell

-1.225

-2.326

GMCSF

-0.929

-3.137

IFNab

-1.433

-0.447

IFNg

-1.443

-0.294

IFNg_GMCSF1

-0.619

-2.064

Rv1432_day32

-0.593

0.0

Rv1565c_day32

0.485

0.0

secA2_input

0.842

1.315

delta_Rv3594

-1.069

-0.45

delta_Rv3717

-0.668

-0.37

delta_Rv3811

-0.625

0.033

delta_Rv0954

-0.756

-0.527

PonA1

-1.04

-2.233

EccD1_KO

0.599

1.924

EspI_KO

0.345

0.0

PE35_KO

0.554

3.652

PPE68_KO

0.211

2.62

glycerol2

0.448

0.27

lignocerate

-0.057

0.684

oleate

0.595

-1.323

phosphatidylcholine

0.682

0.183

acetate

-0.344

0.321

glucAc

0.346

-0.405

Rv0950ko

-0.081

1.155

Rv1096ko

0.106

-0.293

Rv3684ko

0.085

1.333

delta_otsA_trehalose

-0.511

-1.776