Top 10 genes with highest correlation to Rv1352/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2219/- | (cc=0.7277) | info on Rv2219/- |
| Rv2802c/- | (cc=0.5714) | info on Rv2802c/- |
| Rv2821c/- | (cc=0.5153) | info on Rv2821c/- |
| Rv3819/- | (cc=0.5054) | info on Rv3819/- |
| Rv2788/sirR | (cc=0.4929) | info on Rv2788/sirR |
| Rv2237/- | (cc=0.4869) | info on Rv2237/- |
| Rv2119/- | (cc=0.4794) | info on Rv2119/- |
| Rv3287c/rsbW | (cc=0.4774) | info on Rv3287c/rsbW |
| Rv3208A/TB9.4 | (cc=0.475) | info on Rv3208A/TB9.4 |
| Rv2960c/- | (cc=0.4725) | info on Rv2960c/- |
Correlation of Rv1352/- with Rv2219/-
Normalized LFCs for Rv1352/-:
(description and provenance of datasets)
| Rv1352/- | Rv2219/- | |
| Fe_supp_jason_reseq | 2.019 | -0.137 |
| low_pH_jason_reseq | -0.09 | -1.282 |
| NO_jason_reseq | -0.339 | -0.228 |
| B6_jason_reseq | 0.675 | -0.097 |
| MHCII_jason_reseq | -0.018 | 0.229 |
| Isoniazid02 | 0.127 | 0.162 |
| Rifampicin4 | 0.043 | -0.682 |
| Ethambutol3 | -0.165 | -0.146 |
| Meropenem3 | 0.334 | -0.474 |
| Vancomycin16 | 0.862 | -0.669 |
| Rv2680_day32 | 0.109 | -1.75 |
| H37Rv_KO_MarP | -0.246 | 0.404 |
| hypoxia_3wks | -1.077 | -1.655 |
| hypoxia_6wks | -1.184 | -1.625 |
| glycerol | -0.162 | 0.313 |
| cholesterol | 1.24 | -0.676 |
| AJ | -0.884 | 0.096 |
| Bibs02 | 0.901 | 1.766 |
| Bibs02c | 1.391 | -1.605 |
| BL6 | 1.178 | 1.144 |
| BL6a | 0.865 | -1.058 |
| BXD01 | 1.381 | 0.534 |
| BXD010 | 0.152 | -0.684 |
| BXD011 | 0.072 | -0.977 |
| BXD03 | -0.095 | -0.388 |
| BXD04 | 0.949 | -0.845 |
| BXD05 | 1.069 | 0.347 |
| BXD06 | 0.1 | -0.623 |
| BXD07 | 1.075 | 0.883 |
| BXD08 | 0.438 | 0.467 |
| BXD09 | 0.191 | -0.122 |
| CAST | 0.465 | -0.307 |
| CCcont | 1.63 | 1.891 |
| DS01 | 0.986 | -0.678 |
| DS02 | 0.277 | 1.068 |
| DS04 | 0.468 | 0.953 |
| DS0c | -0.826 | -1.158 |
| GP01 | -0.735 | 0.986 |
| GP02 | 1.698 | -0.388 |
| GP0c | 0.437 | 0.248 |
| NOD | -0.044 | -0.905 |
| NZO | -1.026 | -1.065 |
| PWK | -0.138 | -1.189 |
| H37Rv_KO_CtpC | -0.943 | -0.558 |
| H37Rv_KO_CtpD | 1.079 | 2.726 |
| H37Rv_KO_Rv1272 | -0.499 | -0.753 |
| H37Rv_KO_SugABC | -1.259 | -0.677 |
| H37Rv_KO_MbtN | -1.93 | -0.296 |
| Trans05 | -0.327 | -1.121 |
| macrophage_unactivated | 0.78 | 0.234 |
| IL1 | -0.552 | -2.337 |
| Rapamycin | 0.374 | -2.418 |
| Tcell | 1.714 | 1.098 |
| GMCSF | -1.281 | -2.445 |
| IFNab | -1.4 | -2.382 |
| IFNg | -1.122 | -2.475 |
| IFNg_GMCSF1 | -1.668 | -2.476 |
| Rv1432_day32 | -1.342 | -0.18 |
| Rv1565c_day32 | -1.69 | -0.706 |
| secA2_input | 0.603 | 0.0 |
| delta_Rv3594 | 2.082 | 2.213 |
| delta_Rv3717 | 1.397 | 1.562 |
| delta_Rv3811 | 1.674 | 1.487 |
| delta_Rv0954 | -0.981 | 0.311 |
| PonA1 | 1.367 | -0.159 |
| EccD1_KO | 1.049 | 0.697 |
| EspI_KO | 1.089 | 0.605 |
| PE35_KO | 0.615 | 1.779 |
| PPE68_KO | 1.302 | 1.789 |
| glycerol2 | 2.599 | 3.845 |
| lignocerate | 2.813 | 3.444 |
| oleate | 0.624 | 0.0 |
| phosphatidylcholine | 2.882 | 3.37 |
| acetate | 2.864 | 3.661 |
| glucAc | 2.241 | 3.26 |
| Rv0950ko | -2.165 | -2.433 |
| Rv1096ko | -0.914 | -2.021 |
| Rv3684ko | -0.124 | -0.573 |
| delta_otsA_trehalose | 0.508 | 0.321 |