Top 10 genes with highest correlation to Rv1331/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1823/- | (cc=0.6466) | info on Rv1823/- |
| Rv1824/- | (cc=0.5948) | info on Rv1824/- |
| Rv1738/- | (cc=0.5749) | info on Rv1738/- |
| Rv2613c/- | (cc=0.547) | info on Rv2613c/- |
| Rv2091c/- | (cc=0.5444) | info on Rv2091c/- |
| Rv1825/- | (cc=0.5429) | info on Rv1825/- |
| Rv0784/- | (cc=0.5182) | info on Rv0784/- |
| Rv3534c/hsaF | (cc=0.5146) | info on Rv3534c/hsaF |
| Rv0012/- | (cc=0.5133) | info on Rv0012/- |
| Rv0570/nrdZ | (cc=0.5132) | info on Rv0570/nrdZ |
Correlation of Rv1331/- with Rv1823/-
Normalized LFCs for Rv1331/-:
(description and provenance of datasets)
| Rv1331/- | Rv1823/- | |
| Fe_supp_jason_reseq | 0.655 | 2.807 |
| low_pH_jason_reseq | 3.386 | 1.302 |
| NO_jason_reseq | 0.69 | -1.273 |
| B6_jason_reseq | 1.927 | 0.723 |
| MHCII_jason_reseq | 1.868 | 0.818 |
| Isoniazid02 | -1.368 | -0.074 |
| Rifampicin4 | 0.076 | -2.989 |
| Ethambutol3 | -1.367 | -1.369 |
| Meropenem3 | 0.696 | -0.63 |
| Vancomycin16 | -0.753 | -4.717 |
| Rv2680_day32 | -1.59 | -2.814 |
| H37Rv_KO_MarP | 1.595 | 5.537 |
| hypoxia_3wks | -1.679 | -1.483 |
| hypoxia_6wks | -1.186 | -2.088 |
| glycerol | -0.758 | 0.056 |
| cholesterol | -0.497 | -0.676 |
| AJ | -0.988 | -1.849 |
| Bibs02 | 0.082 | -0.525 |
| Bibs02c | -0.139 | -1.269 |
| BL6 | -0.836 | -2.291 |
| BL6a | -1.567 | -1.637 |
| BXD01 | -1.418 | -2.743 |
| BXD010 | -2.614 | -2.697 |
| BXD011 | -1.32 | -1.517 |
| BXD03 | -2.69 | -2.848 |
| BXD04 | -1.905 | -2.481 |
| BXD05 | -1.214 | -2.465 |
| BXD06 | -1.425 | -2.811 |
| BXD07 | -1.129 | -2.777 |
| BXD08 | 0.117 | -2.668 |
| BXD09 | -1.813 | -2.959 |
| CAST | -1.84 | -2.459 |
| CCcont | -0.459 | 0.021 |
| DS01 | -1.562 | -3.389 |
| DS02 | -1.72 | -3.121 |
| DS04 | -0.728 | -3.009 |
| DS0c | -1.103 | -1.86 |
| GP01 | -1.249 | -1.808 |
| GP02 | -0.686 | -1.669 |
| GP0c | -0.753 | -0.924 |
| NOD | -1.635 | -2.312 |
| NZO | -0.465 | -3.094 |
| PWK | -2.245 | -3.44 |
| H37Rv_KO_CtpC | 0.204 | 0.067 |
| H37Rv_KO_CtpD | 0.061 | 0.035 |
| H37Rv_KO_Rv1272 | -0.054 | -1.166 |
| H37Rv_KO_SugABC | -0.023 | -1.987 |
| H37Rv_KO_MbtN | -0.012 | -0.952 |
| Trans05 | -0.739 | -1.345 |
| macrophage_unactivated | 0.518 | 0.0 |
| IL1 | -0.507 | -0.243 |
| Rapamycin | 0.672 | 0.239 |
| Tcell | 0.714 | -0.554 |
| GMCSF | -0.681 | -0.694 |
| IFNab | 0.184 | -0.795 |
| IFNg | 1.141 | 0.208 |
| IFNg_GMCSF1 | 1.254 | -0.826 |
| Rv1432_day32 | -1.967 | -1.752 |
| Rv1565c_day32 | 1.371 | 1.047 |
| secA2_input | -1.357 | 1.291 |
| delta_Rv3594 | 0.0 | -0.471 |
| delta_Rv3717 | 0.578 | -2.153 |
| delta_Rv3811 | 0.022 | -1.374 |
| delta_Rv0954 | -0.939 | -1.395 |
| PonA1 | 0.126 | -0.643 |
| EccD1_KO | 0.181 | -3.526 |
| EspI_KO | 0.328 | -2.892 |
| PE35_KO | 0.744 | -0.21 |
| PPE68_KO | 1.689 | -1.344 |
| glycerol2 | -0.995 | -1.665 |
| lignocerate | 1.038 | 0.124 |
| oleate | -1.202 | -2.691 |
| phosphatidylcholine | 0.623 | 0.63 |
| acetate | 4.124 | 2.233 |
| glucAc | 3.01 | 1.894 |
| Rv0950ko | 0.736 | 0.6 |
| Rv1096ko | 0.374 | -2.962 |
| Rv3684ko | 0.026 | -0.059 |
| delta_otsA_trehalose | -0.519 | 0.289 |