TnSeqCorr

Top 10 genes with highest correlation to Rv1318c/-:

update plotcorrelationlink to info on gene
Rv3655c/- (cc=0.6782) info on Rv3655c/-
Rv2771c/- (cc=0.5668) info on Rv2771c/-
Rv2994/- (cc=0.5048) info on Rv2994/-
Rv0597c/- (cc=0.5011) info on Rv0597c/-
Rv1975/- (cc=0.4885) info on Rv1975/-
Rv0372c/- (cc=0.4816) info on Rv0372c/-
Rv0203/- (cc=0.4686) info on Rv0203/-
Rv0447c/ufaA1 (cc=0.4625) info on Rv0447c/ufaA1
Rv2484c/- (cc=0.4611) info on Rv2484c/-
Rv3714c/- (cc=0.4427) info on Rv3714c/-

Correlation of Rv1318c/- with Rv3655c/-

Normalized LFCs for Rv1318c/-:
(description and provenance of datasets)
Rv1318c/-Rv3655c/-
Fe_supp_jason_reseq

0.455

0.425

low_pH_jason_reseq

-0.39

-1.049

NO_jason_reseq

-0.328

-0.604

B6_jason_reseq

0.078

1.205

MHCII_jason_reseq

0.344

2.276

Isoniazid02

0.14

0.335

Rifampicin4

0.839

0.382

Ethambutol3

1.351

5.673

Meropenem3

0.077

0.092

Vancomycin16

0.395

0.061

Rv2680_day32

-0.489

-1.416

H37Rv_KO_MarP

0.262

-0.591

hypoxia_3wks

0.191

-1.033

hypoxia_6wks

0.209

-0.804

glycerol

-0.453

-0.284

cholesterol

-0.103

-0.588

AJ

-0.212

0.407

Bibs02

0.412

1.009

Bibs02c

0.039

1.447

BL6

-0.335

-3.974

BL6a

-0.174

-0.238

BXD01

-0.317

-1.472

BXD010

0.178

-1.256

BXD011

0.21

-0.233

BXD03

-0.021

-0.862

BXD04

-0.453

-1.781

BXD05

-0.016

-0.792

BXD06

-0.392

-1.621

BXD07

0.261

-0.906

BXD08

-0.094

-1.735

BXD09

-0.011

-0.956

CAST

0.087

-0.36

CCcont

-0.899

-3.528

DS01

0.496

1.646

DS02

-0.145

1.742

DS04

0.218

0.625

DS0c

-0.085

1.009

GP01

0.472

-1.353

GP02

-0.571

-1.112

GP0c

-0.103

-2.31

NOD

0.457

-0.316

NZO

-0.182

0.036

PWK

-0.254

0.753

H37Rv_KO_CtpC

0.337

-1.221

H37Rv_KO_CtpD

0.703

0.864

H37Rv_KO_Rv1272

-0.635

-0.353

H37Rv_KO_SugABC

-0.507

-1.391

H37Rv_KO_MbtN

-0.502

-1.688

Trans05

-0.514

-0.935

macrophage_unactivated

-0.502

-0.451

IL1

-0.181

-1.258

Rapamycin

-0.015

-1.415

Tcell

-0.59

-0.821

GMCSF

0.066

-0.539

IFNab

-0.281

-0.254

IFNg

0.182

-0.762

IFNg_GMCSF1

0.506

0.487

Rv1432_day32

0.671

0.484

Rv1565c_day32

-0.438

-0.122

secA2_input

-0.067

0.999

delta_Rv3594

-0.046

0.08

delta_Rv3717

-0.498

-0.405

delta_Rv3811

0.375

-0.033

delta_Rv0954

-0.443

-0.114

PonA1

-0.557

-2.026

EccD1_KO

-0.204

0.0

EspI_KO

-0.2

-1.252

PE35_KO

0.0

0.315

PPE68_KO

-0.378

0.406

glycerol2

-0.775

-1.739

lignocerate

-0.744

-1.913

oleate

-0.264

-0.413

phosphatidylcholine

-0.399

-1.48

acetate

-0.796

-0.916

glucAc

-0.962

-2.888

Rv0950ko

1.116

2.234

Rv1096ko

0.676

2.702

Rv3684ko

0.976

2.869

delta_otsA_trehalose

-0.243

-0.27