Top 10 genes with highest correlation to Rv1257c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2334/cysK1 | (cc=0.4709) | info on Rv2334/cysK1 |
| Rv2335/cysE | (cc=0.4236) | info on Rv2335/cysE |
| Rv0321/dcd | (cc=0.4208) | info on Rv0321/dcd |
| Rv1778c/- | (cc=0.4194) | info on Rv1778c/- |
| Rv1681/moeX | (cc=0.4127) | info on Rv1681/moeX |
| Rv3466/- | (cc=0.4097) | info on Rv3466/- |
| Rv0892/- | (cc=0.405) | info on Rv0892/- |
| Rv0526/- | (cc=0.3951) | info on Rv0526/- |
| Rv3714c/- | (cc=0.3919) | info on Rv3714c/- |
| Rv0078/- | (cc=0.3893) | info on Rv0078/- |
Correlation of Rv1257c/- with Rv0078/-
Normalized LFCs for Rv1257c/-:
(description and provenance of datasets)
| Rv1257c/- | Rv0078/- | |
| Fe_supp_jason_reseq | 1.328 | -0.23 |
| low_pH_jason_reseq | 0.099 | -0.144 |
| NO_jason_reseq | 1.168 | 0.903 |
| B6_jason_reseq | 0.427 | -1.237 |
| MHCII_jason_reseq | 0.234 | -0.301 |
| Isoniazid02 | 1.196 | -1.112 |
| Rifampicin4 | 0.179 | -0.899 |
| Ethambutol3 | 1.164 | -0.074 |
| Meropenem3 | -0.125 | -0.915 |
| Vancomycin16 | 0.088 | -0.565 |
| Rv2680_day32 | -0.586 | 0.235 |
| H37Rv_KO_MarP | 0.694 | 0.093 |
| hypoxia_3wks | 0.096 | 1.284 |
| hypoxia_6wks | 0.05 | 0.288 |
| glycerol | -0.339 | -0.521 |
| cholesterol | -0.371 | -0.789 |
| AJ | 0.047 | -0.239 |
| Bibs02 | -0.518 | -0.397 |
| Bibs02c | 0.85 | -0.54 |
| BL6 | -0.725 | -1.52 |
| BL6a | 1.102 | 0.0 |
| BXD01 | 0.6 | -0.392 |
| BXD010 | 1.13 | -0.564 |
| BXD011 | 0.207 | -0.086 |
| BXD03 | 0.471 | -0.98 |
| BXD04 | -0.052 | -0.372 |
| BXD05 | 0.041 | 0.71 |
| BXD06 | 0.157 | 0.24 |
| BXD07 | 0.309 | 0.0 |
| BXD08 | 0.193 | -0.521 |
| BXD09 | -0.153 | 0.131 |
| CAST | 0.205 | -0.692 |
| CCcont | -0.215 | -1.082 |
| DS01 | 0.527 | 0.221 |
| DS02 | 0.485 | 1.467 |
| DS04 | -0.326 | -1.405 |
| DS0c | 0.773 | 0.0 |
| GP01 | -0.393 | 0.062 |
| GP02 | 0.338 | -0.929 |
| GP0c | 0.634 | -0.231 |
| NOD | 1.604 | 1.048 |
| NZO | 0.377 | -0.98 |
| PWK | 0.266 | -0.065 |
| H37Rv_KO_CtpC | 0.672 | 0.292 |
| H37Rv_KO_CtpD | 0.051 | 2.097 |
| H37Rv_KO_Rv1272 | -0.272 | 0.998 |
| H37Rv_KO_SugABC | 0.088 | -0.067 |
| H37Rv_KO_MbtN | -1.173 | 0.677 |
| Trans05 | 0.28 | 0.161 |
| macrophage_unactivated | -0.073 | 1.042 |
| IL1 | 0.483 | 0.463 |
| Rapamycin | -0.037 | 0.126 |
| Tcell | 0.147 | 1.075 |
| GMCSF | -0.092 | -1.133 |
| IFNab | 0.647 | -0.529 |
| IFNg | -0.708 | 0.794 |
| IFNg_GMCSF1 | -0.792 | 0.606 |
| Rv1432_day32 | -0.321 | 0.454 |
| Rv1565c_day32 | -0.027 | -0.455 |
| secA2_input | -1.268 | -1.597 |
| delta_Rv3594 | -0.564 | -1.71 |
| delta_Rv3717 | -0.561 | -1.047 |
| delta_Rv3811 | -0.76 | -0.846 |
| delta_Rv0954 | 0.0 | -0.447 |
| PonA1 | -0.155 | -1.554 |
| EccD1_KO | -0.043 | -0.316 |
| EspI_KO | 0.451 | -0.493 |
| PE35_KO | 0.219 | 2.053 |
| PPE68_KO | -0.042 | 1.401 |
| glycerol2 | -1.149 | -3.723 |
| lignocerate | -0.606 | -3.328 |
| oleate | -0.922 | -2.786 |
| phosphatidylcholine | -0.437 | -2.598 |
| acetate | -0.6 | -1.386 |
| glucAc | -0.632 | -4.385 |
| Rv0950ko | 0.371 | 1.025 |
| Rv1096ko | 0.914 | 0.917 |
| Rv3684ko | 0.684 | 0.491 |
| delta_otsA_trehalose | 0.429 | 0.77 |