TnSeqCorr

Top 10 genes with highest correlation to Rv1255c/-:

update plotcorrelationlink to info on gene
Rv2306B/- (cc=0.5803) info on Rv2306B/-
Rv2874/dipZ (cc=0.5171) info on Rv2874/dipZ
Rv1250/- (cc=0.4906) info on Rv1250/-
Rv1514c/- (cc=0.4796) info on Rv1514c/-
Rv3923c/rnpA (cc=0.4675) info on Rv3923c/rnpA
Rv1023/eno (cc=0.4604) info on Rv1023/eno
Rv1974/- (cc=0.4521) info on Rv1974/-
Rv2515c/- (cc=0.4461) info on Rv2515c/-
Rv2470/glbO (cc=0.4439) info on Rv2470/glbO
Rv0840c/pip (cc=0.4422) info on Rv0840c/pip

Correlation of Rv1255c/- with Rv2470/glbO

Normalized LFCs for Rv1255c/-:
(description and provenance of datasets)
Rv1255c/-Rv2470/glbO
Fe_supp_jason_reseq

0.6

0.0

low_pH_jason_reseq

0.254

0.44

NO_jason_reseq

-0.874

0.0

B6_jason_reseq

0.921

0.0

MHCII_jason_reseq

0.389

0.0

Isoniazid02

0.237

1.455

Rifampicin4

-0.051

0.271

Ethambutol3

-0.362

0.122

Meropenem3

0.217

0.528

Vancomycin16

0.294

0.265

Rv2680_day32

1.749

0.0

H37Rv_KO_MarP

0.275

-0.586

hypoxia_3wks

0.558

0.0

hypoxia_6wks

-0.393

0.0

glycerol

-2.12

0.709

cholesterol

-0.976

0.509

AJ

0.808

0.232

Bibs02

-0.469

0.0

Bibs02c

1.176

0.887

BL6

-0.066

0.0

BL6a

1.016

0.696

BXD01

-1.652

0.0

BXD010

-1.581

0.0

BXD011

-0.963

0.243

BXD03

-1.274

0.258

BXD04

-1.134

0.124

BXD05

-1.616

0.135

BXD06

-1.224

0.133

BXD07

-0.802

0.0

BXD08

-1.064

0.133

BXD09

-0.717

0.0

CAST

-0.848

0.23

CCcont

-0.892

1.3

DS01

0.623

0.0

DS02

0.503

0.0

DS04

0.35

0.0

DS0c

0.352

0.596

GP01

-1.186

0.0

GP02

-0.805

0.0

GP0c

-2.503

0.0

NOD

-1.035

1.103

NZO

0.574

0.548

PWK

-0.041

0.539

H37Rv_KO_CtpC

0.145

0.0

H37Rv_KO_CtpD

-0.308

0.127

H37Rv_KO_Rv1272

-0.22

0.141

H37Rv_KO_SugABC

0.464

0.099

H37Rv_KO_MbtN

-1.744

0.0

Trans05

-0.501

0.0

macrophage_unactivated

0.221

0.0

IL1

-0.572

0.0

Rapamycin

0.761

0.0

Tcell

-0.56

0.0

GMCSF

-1.291

0.0

IFNab

0.466

0.0

IFNg

-0.569

0.0

IFNg_GMCSF1

-0.057

0.0

Rv1432_day32

-2.619

0.0

Rv1565c_day32

-0.4

0.599

secA2_input

-1.481

-0.357

delta_Rv3594

-0.635

0.402

delta_Rv3717

-0.214

0.0

delta_Rv3811

0.683

0.0

delta_Rv0954

0.265

1.553

PonA1

-2.052

1.154

EccD1_KO

2.033

1.194

EspI_KO

1.714

2.219

PE35_KO

1.558

2.917

PPE68_KO

1.709

3.52

glycerol2

-1.684

-0.82

lignocerate

-0.638

-1.425

oleate

-1.704

-1.659

phosphatidylcholine

-1.153

-2.007

acetate

0.716

-0.09

glucAc

0.825

0.157

Rv0950ko

-1.01

-0.715

Rv1096ko

-1.9

-2.177

Rv3684ko

-0.681

-0.609

delta_otsA_trehalose

0.135

1.751