Top 10 genes with highest correlation to Rv1249c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1442/bisC | (cc=0.5989) | info on Rv1442/bisC |
| Rv3532/PPE61 | (cc=0.5202) | info on Rv3532/PPE61 |
| Rv0604/lpqO | (cc=0.4964) | info on Rv0604/lpqO |
| Rv3440c/- | (cc=0.472) | info on Rv3440c/- |
| Rv0611c/- | (cc=0.4709) | info on Rv0611c/- |
| Rv1319c/- | (cc=0.4702) | info on Rv1319c/- |
| Rv3784/- | (cc=0.4695) | info on Rv3784/- |
| Rv3234c/tgs3 | (cc=0.4583) | info on Rv3234c/tgs3 |
| Rv0959/- | (cc=0.4538) | info on Rv0959/- |
| Rv0138/- | (cc=0.4538) | info on Rv0138/- |
Correlation of Rv1249c/- with Rv1442/bisC
Normalized LFCs for Rv1249c/-:
(description and provenance of datasets)
| Rv1249c/- | Rv1442/bisC | |
| Fe_supp_jason_reseq | -0.041 | 0.137 |
| low_pH_jason_reseq | -1.241 | -0.673 |
| NO_jason_reseq | -0.809 | -0.431 |
| B6_jason_reseq | 0.178 | 0.363 |
| MHCII_jason_reseq | -0.072 | 0.584 |
| Isoniazid02 | 0.703 | 0.316 |
| Rifampicin4 | 0.579 | 0.341 |
| Ethambutol3 | 1.188 | 0.253 |
| Meropenem3 | 0.412 | 0.391 |
| Vancomycin16 | 0.276 | 0.385 |
| Rv2680_day32 | 0.482 | 0.356 |
| H37Rv_KO_MarP | 0.492 | 0.028 |
| hypoxia_3wks | 0.411 | 0.0 |
| hypoxia_6wks | 0.447 | 0.299 |
| glycerol | 0.402 | 0.53 |
| cholesterol | 0.382 | 0.312 |
| AJ | 0.224 | 0.207 |
| Bibs02 | -0.351 | -0.158 |
| Bibs02c | -0.493 | 0.286 |
| BL6 | -0.042 | -0.101 |
| BL6a | -0.445 | -0.059 |
| BXD01 | -0.466 | -0.045 |
| BXD010 | -0.05 | -0.277 |
| BXD011 | -0.828 | -0.315 |
| BXD03 | -0.385 | -0.146 |
| BXD04 | -0.637 | 0.024 |
| BXD05 | -0.156 | -0.267 |
| BXD06 | -0.266 | -0.242 |
| BXD07 | -0.373 | -0.476 |
| BXD08 | -0.374 | -0.241 |
| BXD09 | -0.39 | -0.391 |
| CAST | 0.349 | -0.164 |
| CCcont | -0.314 | -0.09 |
| DS01 | 0.216 | 0.303 |
| DS02 | 0.05 | 0.336 |
| DS04 | 0.294 | 0.426 |
| DS0c | 0.607 | 0.561 |
| GP01 | -0.243 | 0.127 |
| GP02 | 0.941 | 0.572 |
| GP0c | -0.651 | -0.258 |
| NOD | 0.098 | 0.308 |
| NZO | -0.477 | -0.02 |
| PWK | -0.084 | -0.108 |
| H37Rv_KO_CtpC | 0.48 | -0.391 |
| H37Rv_KO_CtpD | -0.271 | 0.054 |
| H37Rv_KO_Rv1272 | -0.221 | -0.967 |
| H37Rv_KO_SugABC | -0.482 | 0.482 |
| H37Rv_KO_MbtN | -0.62 | 0.27 |
| Trans05 | 0.144 | -0.504 |
| macrophage_unactivated | 0.395 | 0.208 |
| IL1 | 0.0 | 0.448 |
| Rapamycin | -0.743 | 0.0 |
| Tcell | 0.241 | 0.342 |
| GMCSF | -0.116 | 0.438 |
| IFNab | -0.166 | 0.366 |
| IFNg | 0.615 | 0.302 |
| IFNg_GMCSF1 | 0.531 | 0.402 |
| Rv1432_day32 | 0.529 | 0.018 |
| Rv1565c_day32 | 0.403 | 0.742 |
| secA2_input | -0.814 | -0.528 |
| delta_Rv3594 | -0.783 | -0.434 |
| delta_Rv3717 | -1.08 | -0.077 |
| delta_Rv3811 | -0.986 | -0.391 |
| delta_Rv0954 | -0.857 | -0.261 |
| PonA1 | -0.629 | -0.113 |
| EccD1_KO | -0.497 | -0.158 |
| EspI_KO | 0.177 | -0.607 |
| PE35_KO | -0.368 | -0.111 |
| PPE68_KO | 0.25 | 0.0 |
| glycerol2 | -0.123 | 0.716 |
| lignocerate | 1.066 | 1.276 |
| oleate | 0.647 | 0.438 |
| phosphatidylcholine | 1.207 | 1.056 |
| acetate | 0.234 | 0.721 |
| glucAc | 0.151 | 0.793 |
| Rv0950ko | -0.283 | 0.054 |
| Rv1096ko | -0.449 | 0.347 |
| Rv3684ko | -0.167 | 0.0 |
| delta_otsA_trehalose | -0.094 | 0.348 |