Top 10 genes with highest correlation to Rv1196/PPE18:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1194c/- | (cc=0.6576) | info on Rv1194c/- |
| Rv1195/PE13 | (cc=0.6444) | info on Rv1195/PE13 |
| Rv1872c/lldD2 | (cc=0.5814) | info on Rv1872c/lldD2 |
| Rv3223c/sigH | (cc=0.5787) | info on Rv3223c/sigH |
| Rv1364c/- | (cc=0.5578) | info on Rv1364c/- |
| Rv3152/nuoH | (cc=0.5339) | info on Rv3152/nuoH |
| Rv2107/PE22 | (cc=0.5322) | info on Rv2107/PE22 |
| Rv2814c/- | (cc=0.5308) | info on Rv2814c/- |
| Rv2479c/- | (cc=0.5303) | info on Rv2479c/- |
| Rv2106/- | (cc=0.5263) | info on Rv2106/- |
Correlation of Rv1196/PPE18 with Rv1872c/lldD2
Normalized LFCs for Rv1196/PPE18:
(description and provenance of datasets)
| Rv1196/PPE18 | Rv1872c/lldD2 | |
| Fe_supp_jason_reseq | -0.06 | 0.493 |
| low_pH_jason_reseq | -1.091 | -0.893 |
| NO_jason_reseq | -0.914 | -0.971 |
| B6_jason_reseq | -1.217 | -1.228 |
| MHCII_jason_reseq | 0.228 | -1.417 |
| Isoniazid02 | 2.462 | 0.418 |
| Rifampicin4 | 0.842 | -0.114 |
| Ethambutol3 | 1.445 | 0.854 |
| Meropenem3 | -0.121 | 0.158 |
| Vancomycin16 | 0.531 | 0.48 |
| Rv2680_day32 | -1.276 | -0.449 |
| H37Rv_KO_MarP | -0.934 | -0.591 |
| hypoxia_3wks | 0.626 | 1.12 |
| hypoxia_6wks | 0.875 | 1.533 |
| glycerol | 0.828 | 1.369 |
| cholesterol | 0.379 | 0.764 |
| AJ | 1.657 | 0.062 |
| Bibs02 | 0.685 | -0.285 |
| Bibs02c | 1.155 | -0.634 |
| BL6 | 1.282 | 0.128 |
| BL6a | 1.591 | -0.296 |
| BXD01 | 0.97 | 0.164 |
| BXD010 | 0.644 | 0.54 |
| BXD011 | 1.367 | 0.304 |
| BXD03 | 1.557 | 0.252 |
| BXD04 | 0.999 | 0.208 |
| BXD05 | 1.494 | 1.003 |
| BXD06 | 0.919 | 0.469 |
| BXD07 | 0.923 | 0.575 |
| BXD08 | 1.004 | 0.478 |
| BXD09 | 1.004 | 0.318 |
| CAST | 0.863 | -1.313 |
| CCcont | 1.275 | 0.04 |
| DS01 | 1.246 | -1.098 |
| DS02 | 0.892 | 0.871 |
| DS04 | 1.684 | 0.0 |
| DS0c | 1.171 | -0.22 |
| GP01 | 0.765 | -0.021 |
| GP02 | 0.418 | -0.764 |
| GP0c | 0.506 | 0.442 |
| NOD | 0.133 | -0.35 |
| NZO | 0.761 | -0.273 |
| PWK | 0.999 | -0.355 |
| H37Rv_KO_CtpC | -0.175 | 1.363 |
| H37Rv_KO_CtpD | 1.298 | 0.774 |
| H37Rv_KO_Rv1272 | 1.113 | 1.259 |
| H37Rv_KO_SugABC | 1.499 | 1.162 |
| H37Rv_KO_MbtN | 1.065 | 0.564 |
| Trans05 | 0.993 | 0.414 |
| macrophage_unactivated | 0.246 | -1.515 |
| IL1 | -1.16 | -2.928 |
| Rapamycin | -0.35 | -2.056 |
| Tcell | -1.0 | -5.002 |
| GMCSF | -0.742 | -1.935 |
| IFNab | 1.62 | 2.174 |
| IFNg | -1.868 | -6.0 |
| IFNg_GMCSF1 | -0.308 | -5.247 |
| Rv1432_day32 | -0.271 | -0.468 |
| Rv1565c_day32 | -0.101 | -0.224 |
| secA2_input | -0.312 | 1.312 |
| delta_Rv3594 | 0.569 | -0.153 |
| delta_Rv3717 | 0.865 | -0.389 |
| delta_Rv3811 | 0.758 | -0.225 |
| delta_Rv0954 | 0.339 | -0.6 |
| PonA1 | -0.369 | -0.697 |
| EccD1_KO | 0.122 | 1.141 |
| EspI_KO | 1.32 | 0.388 |
| PE35_KO | 0.72 | 0.747 |
| PPE68_KO | 0.157 | 0.326 |
| glycerol2 | 1.103 | 0.301 |
| lignocerate | 0.742 | -0.276 |
| oleate | -0.425 | 0.899 |
| phosphatidylcholine | 1.064 | 0.342 |
| acetate | -0.045 | -1.189 |
| glucAc | 0.176 | -0.983 |
| Rv0950ko | -0.057 | -0.051 |
| Rv1096ko | -0.03 | -0.772 |
| Rv3684ko | -0.226 | -0.891 |
| delta_otsA_trehalose | 1.263 | 1.781 |