Top 10 genes with highest correlation to Rv1128c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1664/pks9 | (cc=0.6092) | info on Rv1664/pks9 |
| Rv3862c/whiB6 | (cc=0.5593) | info on Rv3862c/whiB6 |
| Rv0912/- | (cc=0.5522) | info on Rv0912/- |
| Rv1918c/PPE35 | (cc=0.5416) | info on Rv1918c/PPE35 |
| Rv0647c/- | (cc=0.5296) | info on Rv0647c/- |
| Rv2530c/vapC39 | (cc=0.5105) | info on Rv2530c/vapC39 |
| Rv1517/- | (cc=0.4967) | info on Rv1517/- |
| Rv2129c/- | (cc=0.494) | info on Rv2129c/- |
| Rv1729c/- | (cc=0.4934) | info on Rv1729c/- |
| Rv1021/- | (cc=0.4801) | info on Rv1021/- |
Correlation of Rv1128c/- with Rv3862c/whiB6
Normalized LFCs for Rv1128c/-:
(description and provenance of datasets)
| Rv1128c/- | Rv3862c/whiB6 | |
| Fe_supp_jason_reseq | 1.403 | 0.27 |
| low_pH_jason_reseq | 0.254 | -0.684 |
| NO_jason_reseq | -1.137 | -1.972 |
| B6_jason_reseq | -0.403 | -0.517 |
| MHCII_jason_reseq | -0.355 | -0.251 |
| Isoniazid02 | 0.175 | 0.413 |
| Rifampicin4 | 0.325 | -0.449 |
| Ethambutol3 | 0.074 | -0.202 |
| Meropenem3 | 0.4 | -0.734 |
| Vancomycin16 | 0.753 | 0.475 |
| Rv2680_day32 | 0.715 | 1.898 |
| H37Rv_KO_MarP | 0.467 | 0.056 |
| hypoxia_3wks | 0.371 | -0.016 |
| hypoxia_6wks | 0.0 | 0.192 |
| glycerol | -0.168 | 1.258 |
| cholesterol | -0.475 | 0.721 |
| AJ | 0.578 | -0.664 |
| Bibs02 | -0.234 | 0.543 |
| Bibs02c | -0.805 | 0.599 |
| BL6 | 0.312 | 0.536 |
| BL6a | 0.364 | 0.479 |
| BXD01 | 0.994 | 0.764 |
| BXD010 | 0.435 | 0.886 |
| BXD011 | 0.396 | 0.576 |
| BXD03 | 0.053 | -0.231 |
| BXD04 | 1.334 | 0.935 |
| BXD05 | 0.675 | 1.023 |
| BXD06 | 0.566 | 0.67 |
| BXD07 | 1.608 | 0.533 |
| BXD08 | 1.091 | 0.625 |
| BXD09 | 0.838 | 0.533 |
| CAST | -0.192 | -0.452 |
| CCcont | 0.592 | 0.604 |
| DS01 | 0.589 | 0.814 |
| DS02 | -0.279 | -0.882 |
| DS04 | 0.659 | 0.247 |
| DS0c | 0.0 | -0.228 |
| GP01 | 0.961 | -0.202 |
| GP02 | 0.064 | -0.347 |
| GP0c | 1.224 | 0.624 |
| NOD | -0.093 | 0.384 |
| NZO | 0.433 | 0.152 |
| PWK | 0.489 | -0.176 |
| H37Rv_KO_CtpC | 1.005 | 0.534 |
| H37Rv_KO_CtpD | 1.504 | 1.006 |
| H37Rv_KO_Rv1272 | 1.373 | 1.051 |
| H37Rv_KO_SugABC | -0.127 | 0.796 |
| H37Rv_KO_MbtN | 0.936 | 1.909 |
| Trans05 | 1.784 | 1.106 |
| macrophage_unactivated | 2.235 | 0.931 |
| IL1 | 0.658 | 2.005 |
| Rapamycin | 2.081 | 1.234 |
| Tcell | 1.235 | -1.623 |
| GMCSF | 1.869 | 0.837 |
| IFNab | 1.769 | 3.586 |
| IFNg | 0.911 | 2.705 |
| IFNg_GMCSF1 | 0.952 | 2.124 |
| Rv1432_day32 | -0.439 | 0.257 |
| Rv1565c_day32 | -0.196 | -0.655 |
| secA2_input | 0.839 | -0.675 |
| delta_Rv3594 | 0.867 | 0.491 |
| delta_Rv3717 | -0.068 | 1.436 |
| delta_Rv3811 | 0.226 | 0.803 |
| delta_Rv0954 | -0.655 | -1.081 |
| PonA1 | -0.34 | -0.926 |
| EccD1_KO | -0.753 | -0.391 |
| EspI_KO | -0.248 | -0.836 |
| PE35_KO | -0.388 | -0.753 |
| PPE68_KO | -0.278 | -0.611 |
| glycerol2 | -0.053 | 0.395 |
| lignocerate | -0.095 | -0.448 |
| oleate | 0.052 | 0.937 |
| phosphatidylcholine | -0.053 | 0.071 |
| acetate | -0.607 | -0.941 |
| glucAc | -1.073 | -1.946 |
| Rv0950ko | -0.546 | -1.366 |
| Rv1096ko | 0.814 | -0.995 |
| Rv3684ko | 0.648 | -0.373 |
| delta_otsA_trehalose | -0.965 | -1.32 |