Top 10 genes with highest correlation to Rv1115/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2081c/- | (cc=0.4875) | info on Rv2081c/- |
| Rv2635/- | (cc=0.4812) | info on Rv2635/- |
| Rv2293c/- | (cc=0.4722) | info on Rv2293c/- |
| Rv1671/- | (cc=0.46) | info on Rv1671/- |
| Rv1374c/- | (cc=0.4551) | info on Rv1374c/- |
| Rv1053c/- | (cc=0.4494) | info on Rv1053c/- |
| Rv3638/- | (cc=0.4459) | info on Rv3638/- |
| Rv2332/mez | (cc=0.4456) | info on Rv2332/mez |
| Rv1344/mbtL | (cc=0.4277) | info on Rv1344/mbtL |
| Rv1921c/lppF | (cc=0.4269) | info on Rv1921c/lppF |
Correlation of Rv1115/- with Rv1053c/-
Normalized LFCs for Rv1115/-:
(description and provenance of datasets)
| Rv1115/- | Rv1053c/- | |
| Fe_supp_jason_reseq | 0.418 | 3.157 |
| low_pH_jason_reseq | 0.11 | -0.586 |
| NO_jason_reseq | 0.646 | 0.215 |
| B6_jason_reseq | 0.22 | 1.558 |
| MHCII_jason_reseq | 1.118 | 1.647 |
| Isoniazid02 | 0.776 | 0.023 |
| Rifampicin4 | 0.858 | -0.374 |
| Ethambutol3 | 0.638 | 0.259 |
| Meropenem3 | 0.91 | 1.366 |
| Vancomycin16 | 0.785 | -0.088 |
| Rv2680_day32 | -0.132 | -0.332 |
| H37Rv_KO_MarP | 0.247 | -0.48 |
| hypoxia_3wks | 0.55 | 0.455 |
| hypoxia_6wks | 0.43 | -0.814 |
| glycerol | -0.913 | -1.483 |
| cholesterol | -1.299 | -0.441 |
| AJ | -0.235 | 0.318 |
| Bibs02 | -0.408 | 1.495 |
| Bibs02c | 0.762 | 0.476 |
| BL6 | -1.554 | -2.01 |
| BL6a | 0.317 | 0.019 |
| BXD01 | 0.053 | -0.658 |
| BXD010 | 0.035 | -2.179 |
| BXD011 | -0.328 | 0.413 |
| BXD03 | 0.248 | 0.38 |
| BXD04 | 0.439 | -0.409 |
| BXD05 | -0.744 | -0.275 |
| BXD06 | 0.149 | -0.653 |
| BXD07 | -0.029 | -0.251 |
| BXD08 | -0.518 | -0.532 |
| BXD09 | 0.157 | -0.582 |
| CAST | -0.113 | -0.287 |
| CCcont | -1.155 | -1.318 |
| DS01 | 0.406 | -0.597 |
| DS02 | 0.03 | 1.352 |
| DS04 | -0.125 | -0.329 |
| DS0c | -0.339 | 0.278 |
| GP01 | 0.626 | 0.72 |
| GP02 | -0.733 | 0.462 |
| GP0c | -0.335 | -0.313 |
| NOD | -0.063 | 0.973 |
| NZO | -0.172 | 0.406 |
| PWK | -0.014 | 1.965 |
| H37Rv_KO_CtpC | -0.116 | 1.897 |
| H37Rv_KO_CtpD | 0.077 | -2.035 |
| H37Rv_KO_Rv1272 | 0.501 | 2.117 |
| H37Rv_KO_SugABC | -0.71 | 0.951 |
| H37Rv_KO_MbtN | 1.778 | 0.981 |
| Trans05 | 0.464 | 0.64 |
| macrophage_unactivated | -0.928 | -1.392 |
| IL1 | -0.282 | -1.542 |
| Rapamycin | -0.064 | -1.679 |
| Tcell | -0.137 | -1.271 |
| GMCSF | -0.193 | 0.148 |
| IFNab | -1.246 | -2.911 |
| IFNg | -0.283 | -0.208 |
| IFNg_GMCSF1 | -0.163 | -0.503 |
| Rv1432_day32 | 0.177 | 0.784 |
| Rv1565c_day32 | 0.385 | 0.156 |
| secA2_input | -0.229 | -1.827 |
| delta_Rv3594 | 0.624 | 0.528 |
| delta_Rv3717 | 0.357 | 0.706 |
| delta_Rv3811 | -0.065 | 0.341 |
| delta_Rv0954 | -0.457 | -0.547 |
| PonA1 | -0.12 | -0.682 |
| EccD1_KO | 0.559 | 0.701 |
| EspI_KO | 0.767 | 0.582 |
| PE35_KO | 0.461 | 1.21 |
| PPE68_KO | 0.829 | 1.353 |
| glycerol2 | -0.156 | 0.056 |
| lignocerate | -0.192 | 1.36 |
| oleate | 0.296 | 0.251 |
| phosphatidylcholine | 0.116 | 0.469 |
| acetate | -0.743 | -0.853 |
| glucAc | -0.605 | -0.913 |
| Rv0950ko | -0.657 | -0.724 |
| Rv1096ko | -0.724 | -0.024 |
| Rv3684ko | -0.825 | 0.324 |
| delta_otsA_trehalose | -1.084 | 0.518 |