Top 10 genes with highest correlation to Rv1091/PE_PGRS22:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0578c/PE_PGRS7 | (cc=0.7327) | info on Rv0578c/PE_PGRS7 |
| Rv0833/PE_PGRS13 | (cc=0.714) | info on Rv0833/PE_PGRS13 |
| Rv3512/PE_PGRS56 | (cc=0.6852) | info on Rv3512/PE_PGRS56 |
| Rv3345c/PE_PGRS50 | (cc=0.6672) | info on Rv3345c/PE_PGRS50 |
| Rv1087/PE_PGRS21 | (cc=0.6475) | info on Rv1087/PE_PGRS21 |
| Rv3514/PE_PGRS57 | (cc=0.6168) | info on Rv3514/PE_PGRS57 |
| Rv3508/PE_PGRS54 | (cc=0.6047) | info on Rv3508/PE_PGRS54 |
| Rv2479c/- | (cc=0.6031) | info on Rv2479c/- |
| Rv3355c/- | (cc=0.6029) | info on Rv3355c/- |
| Rv3380c/- | (cc=0.6001) | info on Rv3380c/- |
Correlation of Rv1091/PE_PGRS22 with Rv3345c/PE_PGRS50
Normalized LFCs for Rv1091/PE_PGRS22:
(description and provenance of datasets)
| Rv1091/PE_PGRS22 | Rv3345c/PE_PGRS50 | |
| Fe_supp_jason_reseq | -0.612 | -1.345 |
| low_pH_jason_reseq | -0.318 | -1.425 |
| NO_jason_reseq | -0.087 | -1.336 |
| B6_jason_reseq | -0.686 | -1.393 |
| MHCII_jason_reseq | 0.273 | -0.765 |
| Isoniazid02 | -1.317 | -1.269 |
| Rifampicin4 | 0.563 | 0.306 |
| Ethambutol3 | 0.074 | -0.062 |
| Meropenem3 | 0.268 | 0.059 |
| Vancomycin16 | -0.348 | -0.679 |
| Rv2680_day32 | -0.091 | 0.323 |
| H37Rv_KO_MarP | -0.202 | 0.206 |
| hypoxia_3wks | 0.171 | 0.662 |
| hypoxia_6wks | 0.177 | 0.159 |
| glycerol | 1.072 | 0.97 |
| cholesterol | 0.81 | 0.435 |
| AJ | 0.919 | 0.845 |
| Bibs02 | 1.439 | 0.801 |
| Bibs02c | 0.985 | 0.946 |
| BL6 | -1.01 | -1.081 |
| BL6a | 0.531 | 0.0 |
| BXD01 | 0.349 | 0.392 |
| BXD010 | 0.155 | -0.502 |
| BXD011 | 0.277 | -0.54 |
| BXD03 | 0.043 | 0.167 |
| BXD04 | 0.058 | 0.431 |
| BXD05 | 0.473 | 0.166 |
| BXD06 | -0.258 | -0.523 |
| BXD07 | 0.422 | -0.159 |
| BXD08 | 0.103 | 0.356 |
| BXD09 | -0.046 | -0.422 |
| CAST | 0.247 | -0.265 |
| CCcont | -0.609 | -0.842 |
| DS01 | 0.45 | -0.577 |
| DS02 | 0.688 | 0.137 |
| DS04 | 0.568 | -0.37 |
| DS0c | 0.035 | -0.991 |
| GP01 | 0.505 | 0.375 |
| GP02 | 0.547 | 0.846 |
| GP0c | 0.472 | 0.412 |
| NOD | 0.488 | 0.638 |
| NZO | -0.133 | 0.126 |
| PWK | 0.666 | 0.388 |
| H37Rv_KO_CtpC | 0.076 | -0.109 |
| H37Rv_KO_CtpD | 0.865 | 0.339 |
| H37Rv_KO_Rv1272 | 2.015 | 0.304 |
| H37Rv_KO_SugABC | -0.529 | 0.083 |
| H37Rv_KO_MbtN | -0.667 | 1.406 |
| Trans05 | 0.35 | 0.947 |
| macrophage_unactivated | -0.527 | -0.514 |
| IL1 | -1.883 | -2.011 |
| Rapamycin | -1.676 | -1.715 |
| Tcell | -1.245 | -1.466 |
| GMCSF | -0.747 | 0.069 |
| IFNab | -2.515 | -2.44 |
| IFNg | -1.307 | -0.93 |
| IFNg_GMCSF1 | -0.669 | -0.698 |
| Rv1432_day32 | 0.441 | 0.619 |
| Rv1565c_day32 | -0.924 | -0.3 |
| secA2_input | -0.211 | 0.473 |
| delta_Rv3594 | 0.229 | -0.167 |
| delta_Rv3717 | 0.294 | -0.224 |
| delta_Rv3811 | -0.168 | -0.373 |
| delta_Rv0954 | -1.098 | -1.017 |
| PonA1 | 0.21 | -0.112 |
| EccD1_KO | 0.513 | -0.385 |
| EspI_KO | -0.459 | -0.271 |
| PE35_KO | 0.067 | -0.61 |
| PPE68_KO | 0.074 | -0.669 |
| glycerol2 | -0.666 | 0.085 |
| lignocerate | -1.094 | -0.16 |
| oleate | -0.102 | 0.328 |
| phosphatidylcholine | -0.564 | 0.127 |
| acetate | -0.557 | 0.514 |
| glucAc | -0.543 | 0.124 |
| Rv0950ko | 0.476 | 0.166 |
| Rv1096ko | 1.215 | 0.232 |
| Rv3684ko | 0.19 | -0.426 |
| delta_otsA_trehalose | 0.272 | 0.654 |