Top 10 genes with highest correlation to Rv1091/PE_PGRS22:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0578c/PE_PGRS7 | (cc=0.7327) | info on Rv0578c/PE_PGRS7 |
| Rv0833/PE_PGRS13 | (cc=0.714) | info on Rv0833/PE_PGRS13 |
| Rv3512/PE_PGRS56 | (cc=0.6852) | info on Rv3512/PE_PGRS56 |
| Rv3345c/PE_PGRS50 | (cc=0.6672) | info on Rv3345c/PE_PGRS50 |
| Rv1087/PE_PGRS21 | (cc=0.6475) | info on Rv1087/PE_PGRS21 |
| Rv3514/PE_PGRS57 | (cc=0.6168) | info on Rv3514/PE_PGRS57 |
| Rv3508/PE_PGRS54 | (cc=0.6047) | info on Rv3508/PE_PGRS54 |
| Rv2479c/- | (cc=0.6031) | info on Rv2479c/- |
| Rv3355c/- | (cc=0.6029) | info on Rv3355c/- |
| Rv3380c/- | (cc=0.6001) | info on Rv3380c/- |
Correlation of Rv1091/PE_PGRS22 with Rv0578c/PE_PGRS7
Normalized LFCs for Rv1091/PE_PGRS22:
(description and provenance of datasets)
| Rv1091/PE_PGRS22 | Rv0578c/PE_PGRS7 | |
| Fe_supp_jason_reseq | -0.612 | -2.133 |
| low_pH_jason_reseq | -0.318 | -0.806 |
| NO_jason_reseq | -0.087 | -0.99 |
| B6_jason_reseq | -0.686 | -0.628 |
| MHCII_jason_reseq | 0.273 | -0.418 |
| Isoniazid02 | -1.317 | -0.735 |
| Rifampicin4 | 0.563 | 0.42 |
| Ethambutol3 | 0.074 | 1.592 |
| Meropenem3 | 0.268 | 0.944 |
| Vancomycin16 | -0.348 | -0.271 |
| Rv2680_day32 | -0.091 | 0.172 |
| H37Rv_KO_MarP | -0.202 | 0.574 |
| hypoxia_3wks | 0.171 | -0.231 |
| hypoxia_6wks | 0.177 | -0.808 |
| glycerol | 1.072 | 0.238 |
| cholesterol | 0.81 | 0.276 |
| AJ | 0.919 | 0.983 |
| Bibs02 | 1.439 | 0.588 |
| Bibs02c | 0.985 | 0.828 |
| BL6 | -1.01 | -1.265 |
| BL6a | 0.531 | -0.739 |
| BXD01 | 0.349 | -0.89 |
| BXD010 | 0.155 | -0.64 |
| BXD011 | 0.277 | -0.87 |
| BXD03 | 0.043 | -0.464 |
| BXD04 | 0.058 | -0.796 |
| BXD05 | 0.473 | -0.386 |
| BXD06 | -0.258 | -1.211 |
| BXD07 | 0.422 | -0.788 |
| BXD08 | 0.103 | 0.107 |
| BXD09 | -0.046 | -0.702 |
| CAST | 0.247 | 0.095 |
| CCcont | -0.609 | -1.146 |
| DS01 | 0.45 | -0.101 |
| DS02 | 0.688 | 0.175 |
| DS04 | 0.568 | 0.624 |
| DS0c | 0.035 | -0.14 |
| GP01 | 0.505 | -0.31 |
| GP02 | 0.547 | -0.054 |
| GP0c | 0.472 | -0.113 |
| NOD | 0.488 | -0.583 |
| NZO | -0.133 | 0.0 |
| PWK | 0.666 | 0.269 |
| H37Rv_KO_CtpC | 0.076 | -0.511 |
| H37Rv_KO_CtpD | 0.865 | 0.606 |
| H37Rv_KO_Rv1272 | 2.015 | 0.141 |
| H37Rv_KO_SugABC | -0.529 | -0.37 |
| H37Rv_KO_MbtN | -0.667 | -0.481 |
| Trans05 | 0.35 | -0.056 |
| macrophage_unactivated | -0.527 | -1.891 |
| IL1 | -1.883 | -2.186 |
| Rapamycin | -1.676 | -2.569 |
| Tcell | -1.245 | -2.098 |
| GMCSF | -0.747 | -1.251 |
| IFNab | -2.515 | -2.851 |
| IFNg | -1.307 | -2.376 |
| IFNg_GMCSF1 | -0.669 | -1.882 |
| Rv1432_day32 | 0.441 | 1.064 |
| Rv1565c_day32 | -0.924 | -0.182 |
| secA2_input | -0.211 | 0.814 |
| delta_Rv3594 | 0.229 | 0.142 |
| delta_Rv3717 | 0.294 | -0.232 |
| delta_Rv3811 | -0.168 | -0.375 |
| delta_Rv0954 | -1.098 | -0.544 |
| PonA1 | 0.21 | -0.091 |
| EccD1_KO | 0.513 | -0.237 |
| EspI_KO | -0.459 | -0.536 |
| PE35_KO | 0.067 | -0.607 |
| PPE68_KO | 0.074 | -0.602 |
| glycerol2 | -0.666 | -1.852 |
| lignocerate | -1.094 | -2.21 |
| oleate | -0.102 | -1.528 |
| phosphatidylcholine | -0.564 | -1.852 |
| acetate | -0.557 | -2.135 |
| glucAc | -0.543 | -1.532 |
| Rv0950ko | 0.476 | -0.133 |
| Rv1096ko | 1.215 | 0.718 |
| Rv3684ko | 0.19 | 0.534 |
| delta_otsA_trehalose | 0.272 | -0.341 |