Top 10 genes with highest correlation to Rv1067c/PE_PGRS19:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0578c/PE_PGRS7 | (cc=0.5722) | info on Rv0578c/PE_PGRS7 |
| Rv1091/PE_PGRS22 | (cc=0.5702) | info on Rv1091/PE_PGRS22 |
| Rv1452c/PE_PGRS28 | (cc=0.5443) | info on Rv1452c/PE_PGRS28 |
| Rv0526/- | (cc=0.5346) | info on Rv0526/- |
| Rv3533c/PPE62 | (cc=0.5314) | info on Rv3533c/PPE62 |
| Rv3022A/PE29 | (cc=0.5123) | info on Rv3022A/PE29 |
| Rv1709/scpA | (cc=0.4986) | info on Rv1709/scpA |
| Rv1756c/- | (cc=0.4911) | info on Rv1756c/- |
| Rv0598c/vapC27 | (cc=0.4799) | info on Rv0598c/vapC27 |
| Rv2228c/- | (cc=0.474) | info on Rv2228c/- |
Correlation of Rv1067c/PE_PGRS19 with Rv2228c/-
Normalized LFCs for Rv1067c/PE_PGRS19:
(description and provenance of datasets)
| Rv1067c/PE_PGRS19 | Rv2228c/- | |
| Fe_supp_jason_reseq | 0.137 | 0.268 |
| low_pH_jason_reseq | -0.734 | -1.134 |
| NO_jason_reseq | -0.559 | 0.0 |
| B6_jason_reseq | -0.082 | 1.206 |
| MHCII_jason_reseq | -0.054 | 0.315 |
| Isoniazid02 | -0.706 | -0.49 |
| Rifampicin4 | -0.087 | -0.523 |
| Ethambutol3 | -0.019 | -0.153 |
| Meropenem3 | 1.429 | 0.138 |
| Vancomycin16 | -0.589 | -0.512 |
| Rv2680_day32 | -0.223 | 0.0 |
| H37Rv_KO_MarP | -0.133 | -1.065 |
| hypoxia_3wks | -0.056 | -0.427 |
| hypoxia_6wks | -0.589 | -0.223 |
| glycerol | 1.303 | 2.07 |
| cholesterol | 0.513 | 0.159 |
| AJ | 1.277 | 0.0 |
| Bibs02 | 0.313 | -0.109 |
| Bibs02c | 0.474 | -0.887 |
| BL6 | -0.18 | -0.074 |
| BL6a | -0.174 | -0.377 |
| BXD01 | 0.78 | 0.552 |
| BXD010 | 0.104 | 0.206 |
| BXD011 | -0.313 | -0.335 |
| BXD03 | -0.046 | 0.0 |
| BXD04 | -0.178 | 0.932 |
| BXD05 | -0.22 | -0.256 |
| BXD06 | 0.407 | 0.513 |
| BXD07 | 0.068 | 0.0 |
| BXD08 | 0.471 | -0.35 |
| BXD09 | 0.135 | 0.596 |
| CAST | 0.36 | -0.284 |
| CCcont | 0.025 | 0.898 |
| DS01 | 0.154 | 1.641 |
| DS02 | 0.521 | 1.638 |
| DS04 | 0.386 | -0.115 |
| DS0c | 0.401 | 1.867 |
| GP01 | 1.139 | -0.607 |
| GP02 | 1.098 | -0.353 |
| GP0c | 0.24 | -0.16 |
| NOD | 0.285 | 0.127 |
| NZO | 0.608 | 0.994 |
| PWK | 0.128 | 0.412 |
| H37Rv_KO_CtpC | 0.454 | 0.0 |
| H37Rv_KO_CtpD | 0.874 | 0.0 |
| H37Rv_KO_Rv1272 | 0.69 | -0.084 |
| H37Rv_KO_SugABC | -0.034 | -0.509 |
| H37Rv_KO_MbtN | -0.616 | -0.061 |
| Trans05 | -0.469 | -0.444 |
| macrophage_unactivated | -0.117 | 0.83 |
| IL1 | -1.16 | -0.611 |
| Rapamycin | -0.405 | -0.307 |
| Tcell | -0.365 | 0.59 |
| GMCSF | 0.615 | 0.478 |
| IFNab | -0.46 | 0.0 |
| IFNg | -0.569 | -0.551 |
| IFNg_GMCSF1 | 0.057 | 0.0 |
| Rv1432_day32 | 0.428 | 0.0 |
| Rv1565c_day32 | -0.648 | 0.0 |
| secA2_input | 1.522 | -1.021 |
| delta_Rv3594 | -0.326 | 0.47 |
| delta_Rv3717 | -0.596 | -0.992 |
| delta_Rv3811 | -0.36 | -1.172 |
| delta_Rv0954 | -1.79 | -1.499 |
| PonA1 | 0.029 | -0.286 |
| EccD1_KO | 0.608 | 0.178 |
| EspI_KO | 0.034 | 0.0 |
| PE35_KO | 0.572 | -0.166 |
| PPE68_KO | 0.118 | 0.813 |
| glycerol2 | -1.886 | -1.202 |
| lignocerate | -1.465 | -1.55 |
| oleate | -0.8 | -0.345 |
| phosphatidylcholine | -1.335 | -0.803 |
| acetate | -1.682 | -0.663 |
| glucAc | -1.271 | -1.831 |
| Rv0950ko | 0.208 | 0.172 |
| Rv1096ko | 0.238 | -0.555 |
| Rv3684ko | -0.17 | -0.393 |
| delta_otsA_trehalose | 0.157 | 0.564 |