Top 10 genes with highest correlation to Rv0978c/PE_PGRS17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2615c/PE_PGRS45 | (cc=0.5874) | info on Rv2615c/PE_PGRS45 |
| Rv3504/fadE26 | (cc=0.564) | info on Rv3504/fadE26 |
| Rv3309c/upp | (cc=0.501) | info on Rv3309c/upp |
| Rv0551c/fadD8 | (cc=0.4965) | info on Rv0551c/fadD8 |
| Rv1647/- | (cc=0.4871) | info on Rv1647/- |
| Rv3447c/eccC4 | (cc=0.4647) | info on Rv3447c/eccC4 |
| Rv2489c/- | (cc=0.4601) | info on Rv2489c/- |
| Rv2306A/- | (cc=0.4534) | info on Rv2306A/- |
| Rv1242/vapC33 | (cc=0.4481) | info on Rv1242/vapC33 |
| Rv3451/cut3 | (cc=0.4427) | info on Rv3451/cut3 |
Correlation of Rv0978c/PE_PGRS17 with Rv2615c/PE_PGRS45
Normalized LFCs for Rv0978c/PE_PGRS17:
(description and provenance of datasets)
| Rv0978c/PE_PGRS17 | Rv2615c/PE_PGRS45 | |
| Fe_supp_jason_reseq | -0.218 | -1.085 |
| low_pH_jason_reseq | -0.94 | -0.669 |
| NO_jason_reseq | 0.1 | 0.097 |
| B6_jason_reseq | 0.54 | -0.357 |
| MHCII_jason_reseq | -0.144 | 0.148 |
| Isoniazid02 | -1.067 | -1.291 |
| Rifampicin4 | 0.219 | 0.352 |
| Ethambutol3 | -0.663 | -0.563 |
| Meropenem3 | -0.321 | -0.575 |
| Vancomycin16 | -0.454 | -0.761 |
| Rv2680_day32 | 0.33 | 0.016 |
| H37Rv_KO_MarP | 0.556 | 0.525 |
| hypoxia_3wks | 0.682 | -0.211 |
| hypoxia_6wks | 0.946 | -0.251 |
| glycerol | 0.511 | 0.085 |
| cholesterol | 0.166 | 0.553 |
| AJ | 0.363 | 0.524 |
| Bibs02 | 0.526 | 0.233 |
| Bibs02c | -0.326 | -0.303 |
| BL6 | 0.173 | -1.318 |
| BL6a | 0.047 | -1.037 |
| BXD01 | 0.137 | -0.763 |
| BXD010 | -0.018 | -0.546 |
| BXD011 | 0.199 | -0.832 |
| BXD03 | -0.062 | -0.401 |
| BXD04 | 0.579 | -0.766 |
| BXD05 | 0.311 | 0.033 |
| BXD06 | 0.161 | -0.872 |
| BXD07 | 0.192 | -0.697 |
| BXD08 | -0.213 | -0.809 |
| BXD09 | -0.095 | -0.68 |
| CAST | 0.023 | 0.267 |
| CCcont | -0.391 | -1.5 |
| DS01 | 0.181 | -0.181 |
| DS02 | 0.038 | -0.054 |
| DS04 | -0.326 | -0.187 |
| DS0c | 0.159 | -0.209 |
| GP01 | 0.998 | -0.193 |
| GP02 | 0.496 | 0.154 |
| GP0c | 0.437 | -0.407 |
| NOD | -0.28 | -0.49 |
| NZO | 0.221 | 0.431 |
| PWK | -0.192 | 0.06 |
| H37Rv_KO_CtpC | -0.086 | -0.417 |
| H37Rv_KO_CtpD | 0.047 | -0.886 |
| H37Rv_KO_Rv1272 | -0.035 | -0.628 |
| H37Rv_KO_SugABC | -0.146 | -0.82 |
| H37Rv_KO_MbtN | 0.149 | 0.293 |
| Trans05 | -0.554 | -1.047 |
| macrophage_unactivated | -0.366 | -1.01 |
| IL1 | -0.469 | -1.118 |
| Rapamycin | -0.592 | -0.982 |
| Tcell | -0.378 | -1.342 |
| GMCSF | 0.325 | 0.57 |
| IFNab | -0.68 | -0.457 |
| IFNg | -0.027 | -0.457 |
| IFNg_GMCSF1 | -0.258 | -0.028 |
| Rv1432_day32 | -0.021 | 0.678 |
| Rv1565c_day32 | 0.616 | 0.477 |
| secA2_input | -0.133 | -0.477 |
| delta_Rv3594 | -0.02 | -0.349 |
| delta_Rv3717 | -0.521 | -0.449 |
| delta_Rv3811 | -0.311 | -0.937 |
| delta_Rv0954 | 0.231 | -0.053 |
| PonA1 | 0.233 | 0.194 |
| EccD1_KO | 0.615 | 0.372 |
| EspI_KO | 1.243 | 0.351 |
| PE35_KO | 0.195 | 0.33 |
| PPE68_KO | 0.403 | -0.211 |
| glycerol2 | -0.126 | -1.702 |
| lignocerate | -0.357 | -0.967 |
| oleate | 0.187 | -1.344 |
| phosphatidylcholine | -0.085 | -1.139 |
| acetate | -0.798 | -0.755 |
| glucAc | -0.313 | -0.125 |
| Rv0950ko | 0.597 | 0.124 |
| Rv1096ko | 0.51 | 0.184 |
| Rv3684ko | 0.18 | -0.069 |
| delta_otsA_trehalose | 1.285 | 2.564 |