Top 10 genes with highest correlation to Rv0925c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3291c/lrpA | (cc=0.536) | info on Rv3291c/lrpA |
| Rv0811c/- | (cc=0.4989) | info on Rv0811c/- |
| Rv3852/hns | (cc=0.4868) | info on Rv3852/hns |
| Rv3162c/- | (cc=0.4821) | info on Rv3162c/- |
| Rv1545/- | (cc=0.4746) | info on Rv1545/- |
| Rv3233c/- | (cc=0.4632) | info on Rv3233c/- |
| Rv3566c/nat | (cc=0.4545) | info on Rv3566c/nat |
| Rv1419/- | (cc=0.4473) | info on Rv1419/- |
| Rv0908/ctpE | (cc=0.446) | info on Rv0908/ctpE |
| Rv1125/- | (cc=0.4454) | info on Rv1125/- |
Correlation of Rv0925c/- with Rv3566c/nat
Normalized LFCs for Rv0925c/-:
(description and provenance of datasets)
| Rv0925c/- | Rv3566c/nat | |
| Fe_supp_jason_reseq | -0.339 | -1.146 |
| low_pH_jason_reseq | 0.445 | -1.036 |
| NO_jason_reseq | 0.045 | -0.945 |
| B6_jason_reseq | 0.55 | -0.353 |
| MHCII_jason_reseq | -0.339 | 0.687 |
| Isoniazid02 | -1.323 | -3.683 |
| Rifampicin4 | -0.06 | 0.801 |
| Ethambutol3 | -1.096 | -3.539 |
| Meropenem3 | -1.051 | -2.94 |
| Vancomycin16 | -0.692 | -0.788 |
| Rv2680_day32 | 0.141 | 0.751 |
| H37Rv_KO_MarP | 0.514 | 0.461 |
| hypoxia_3wks | -0.574 | 0.14 |
| hypoxia_6wks | -0.365 | -0.309 |
| glycerol | -0.696 | 0.039 |
| cholesterol | -0.09 | -0.366 |
| AJ | -0.166 | 0.067 |
| Bibs02 | 0.195 | -0.331 |
| Bibs02c | 0.062 | -0.355 |
| BL6 | 0.686 | -0.024 |
| BL6a | 0.125 | -1.534 |
| BXD01 | 0.082 | -0.577 |
| BXD010 | -0.529 | -0.819 |
| BXD011 | -0.221 | -1.487 |
| BXD03 | -0.22 | -0.641 |
| BXD04 | -0.171 | -0.791 |
| BXD05 | -0.283 | -2.162 |
| BXD06 | -0.205 | -0.98 |
| BXD07 | -0.024 | -1.46 |
| BXD08 | -0.272 | -0.122 |
| BXD09 | -0.451 | -1.409 |
| CAST | -0.153 | -0.115 |
| CCcont | -0.229 | -0.707 |
| DS01 | -0.051 | 0.715 |
| DS02 | 0.29 | 0.578 |
| DS04 | 0.153 | 0.038 |
| DS0c | -0.126 | 0.493 |
| GP01 | -0.795 | -1.347 |
| GP02 | -0.952 | -0.19 |
| GP0c | -0.942 | -1.118 |
| NOD | 0.465 | 0.21 |
| NZO | 0.051 | 0.545 |
| PWK | 0.661 | -0.401 |
| H37Rv_KO_CtpC | -1.017 | -0.275 |
| H37Rv_KO_CtpD | -0.548 | -1.176 |
| H37Rv_KO_Rv1272 | 0.965 | 0.31 |
| H37Rv_KO_SugABC | 0.709 | 0.084 |
| H37Rv_KO_MbtN | -0.018 | -0.659 |
| Trans05 | 0.512 | -1.012 |
| macrophage_unactivated | 0.167 | -0.783 |
| IL1 | -0.021 | -1.409 |
| Rapamycin | -0.083 | -0.853 |
| Tcell | -0.179 | -1.326 |
| GMCSF | 0.259 | -0.422 |
| IFNab | -0.541 | -2.252 |
| IFNg | 0.227 | -1.269 |
| IFNg_GMCSF1 | 0.308 | -0.503 |
| Rv1432_day32 | -0.113 | -0.072 |
| Rv1565c_day32 | 0.417 | 0.747 |
| secA2_input | 0.473 | -0.678 |
| delta_Rv3594 | -0.413 | 0.102 |
| delta_Rv3717 | -0.613 | -0.571 |
| delta_Rv3811 | -0.706 | 0.693 |
| delta_Rv0954 | -0.178 | -0.547 |
| PonA1 | -0.105 | 0.594 |
| EccD1_KO | 0.408 | 0.378 |
| EspI_KO | 0.431 | -0.234 |
| PE35_KO | 0.84 | 0.496 |
| PPE68_KO | 0.595 | -0.064 |
| glycerol2 | -0.439 | -0.151 |
| lignocerate | -0.028 | -0.237 |
| oleate | -0.197 | -0.214 |
| phosphatidylcholine | -0.399 | -0.112 |
| acetate | -0.618 | -0.274 |
| glucAc | -0.504 | -0.248 |
| Rv0950ko | 0.202 | -0.464 |
| Rv1096ko | 1.782 | 0.663 |
| Rv3684ko | 1.179 | -0.183 |
| delta_otsA_trehalose | 0.202 | -1.003 |