Top 10 genes with highest correlation to Rv0879c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2655c/- | (cc=0.538) | info on Rv2655c/- |
| Rv0668/rpoC | (cc=0.5354) | info on Rv0668/rpoC |
| Rv3024c/trmU | (cc=0.5278) | info on Rv3024c/trmU |
| Rv2993c/- | (cc=0.5146) | info on Rv2993c/- |
| Rv1712/cmk | (cc=0.4974) | info on Rv1712/cmk |
| Rv1308/atpA | (cc=0.4924) | info on Rv1308/atpA |
| Rv1239c/corA | (cc=0.4813) | info on Rv1239c/corA |
| Rv0047c/- | (cc=0.4747) | info on Rv0047c/- |
| Rv3842c/glpQ1 | (cc=0.4729) | info on Rv3842c/glpQ1 |
| Rv3248c/sahH | (cc=0.4617) | info on Rv3248c/sahH |
Correlation of Rv0879c/- with Rv2655c/-
Normalized LFCs for Rv0879c/-:
(description and provenance of datasets)
| Rv0879c/- | Rv2655c/- | |
| Fe_supp_jason_reseq | -0.39 | -0.665 |
| low_pH_jason_reseq | 3.554 | 1.641 |
| NO_jason_reseq | 3.085 | 1.717 |
| B6_jason_reseq | 2.785 | 0.868 |
| MHCII_jason_reseq | -0.487 | -0.526 |
| Isoniazid02 | 2.165 | -0.054 |
| Rifampicin4 | -1.313 | 0.065 |
| Ethambutol3 | 0.593 | 1.524 |
| Meropenem3 | -0.292 | 0.767 |
| Vancomycin16 | -1.151 | 0.032 |
| Rv2680_day32 | 0.0 | 0.131 |
| H37Rv_KO_MarP | 0.106 | 0.141 |
| hypoxia_3wks | -4.37 | -0.901 |
| hypoxia_6wks | 1.188 | 0.409 |
| glycerol | -0.906 | -0.268 |
| cholesterol | -0.762 | 0.171 |
| AJ | -2.397 | 0.647 |
| Bibs02 | -2.787 | 0.111 |
| Bibs02c | 0.0 | -0.135 |
| BL6 | -1.907 | 0.28 |
| BL6a | 2.642 | 0.456 |
| BXD01 | 2.363 | 0.735 |
| BXD010 | 0.329 | 0.791 |
| BXD011 | 3.301 | 1.682 |
| BXD03 | 0.268 | 0.661 |
| BXD04 | 0.611 | -0.209 |
| BXD05 | 2.006 | 0.748 |
| BXD06 | 1.543 | 0.772 |
| BXD07 | 2.576 | 1.172 |
| BXD08 | 0.0 | 1.129 |
| BXD09 | 1.495 | 0.781 |
| CAST | -0.566 | 1.3 |
| CCcont | -1.867 | -0.785 |
| DS01 | -0.972 | 0.544 |
| DS02 | -1.979 | 0.487 |
| DS04 | -2.764 | -0.364 |
| DS0c | -1.851 | -0.195 |
| GP01 | -1.407 | 0.157 |
| GP02 | -0.807 | 0.619 |
| GP0c | 1.482 | 0.216 |
| NOD | -2.32 | 1.217 |
| NZO | -0.204 | 1.062 |
| PWK | -0.953 | 2.322 |
| H37Rv_KO_CtpC | 0.753 | 0.225 |
| H37Rv_KO_CtpD | 3.509 | -0.651 |
| H37Rv_KO_Rv1272 | -1.128 | 0.176 |
| H37Rv_KO_SugABC | -1.51 | -0.032 |
| H37Rv_KO_MbtN | 3.036 | 0.927 |
| Trans05 | 0.385 | 1.608 |
| macrophage_unactivated | -1.916 | -1.023 |
| IL1 | -1.296 | -0.486 |
| Rapamycin | -2.75 | -0.743 |
| Tcell | -0.143 | -0.362 |
| GMCSF | -3.992 | -0.349 |
| IFNab | -2.473 | -0.732 |
| IFNg | 0.756 | -0.184 |
| IFNg_GMCSF1 | -1.106 | -0.217 |
| Rv1432_day32 | 0.0 | -0.588 |
| Rv1565c_day32 | 0.559 | -0.607 |
| secA2_input | 3.788 | 1.241 |
| delta_Rv3594 | 0.512 | -0.24 |
| delta_Rv3717 | 1.86 | 0.247 |
| delta_Rv3811 | 0.876 | 0.138 |
| delta_Rv0954 | -1.93 | -0.548 |
| PonA1 | 0.771 | -0.615 |
| EccD1_KO | -1.365 | -0.987 |
| EspI_KO | 0.0 | 0.145 |
| PE35_KO | -0.922 | -0.648 |
| PPE68_KO | 1.286 | 0.32 |
| glycerol2 | -2.375 | -1.527 |
| lignocerate | -2.241 | -1.803 |
| oleate | -3.726 | -0.922 |
| phosphatidylcholine | -2.801 | -1.527 |
| acetate | -3.469 | -1.765 |
| glucAc | -1.902 | -1.717 |
| Rv0950ko | 0.567 | -0.178 |
| Rv1096ko | 2.18 | -0.404 |
| Rv3684ko | -1.546 | -0.193 |
| delta_otsA_trehalose | -0.035 | 1.027 |