Top 10 genes with highest correlation to Rv0848/cysK2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1291c/- | (cc=0.6122) | info on Rv1291c/- |
| Rv2831/echA16 | (cc=0.5718) | info on Rv2831/echA16 |
| Rv0006/gyrA | (cc=0.5685) | info on Rv0006/gyrA |
| Rv0139/- | (cc=0.566) | info on Rv0139/- |
| Rv3757c/proW | (cc=0.5643) | info on Rv3757c/proW |
| Rv0377/- | (cc=0.5584) | info on Rv0377/- |
| Rv1681/moeX | (cc=0.5323) | info on Rv1681/moeX |
| Rv1075c/- | (cc=0.5214) | info on Rv1075c/- |
| Rv2032/acg | (cc=0.5084) | info on Rv2032/acg |
| Rv2013/- | (cc=0.5071) | info on Rv2013/- |
Correlation of Rv0848/cysK2 with Rv0377/-
Normalized LFCs for Rv0848/cysK2:
(description and provenance of datasets)
| Rv0848/cysK2 | Rv0377/- | |
| Fe_supp_jason_reseq | 0.221 | -0.655 |
| low_pH_jason_reseq | -0.214 | -0.893 |
| NO_jason_reseq | 1.152 | 1.189 |
| B6_jason_reseq | 1.176 | 0.636 |
| MHCII_jason_reseq | 0.917 | 0.217 |
| Isoniazid02 | 0.469 | 0.451 |
| Rifampicin4 | 0.46 | 0.368 |
| Ethambutol3 | 2.419 | 0.396 |
| Meropenem3 | 0.053 | 0.503 |
| Vancomycin16 | 0.708 | 0.26 |
| Rv2680_day32 | 1.311 | -0.642 |
| H37Rv_KO_MarP | 0.772 | 0.746 |
| hypoxia_3wks | 0.694 | -0.694 |
| hypoxia_6wks | 0.768 | -0.821 |
| glycerol | -0.494 | -1.173 |
| cholesterol | -0.242 | 0.323 |
| AJ | -0.568 | 0.148 |
| Bibs02 | 0.989 | 1.06 |
| Bibs02c | -0.097 | 0.441 |
| BL6 | -0.35 | -1.4 |
| BL6a | -0.462 | -0.346 |
| BXD01 | -0.349 | -1.205 |
| BXD010 | -0.555 | -0.352 |
| BXD011 | -0.958 | -1.696 |
| BXD03 | -0.92 | -1.01 |
| BXD04 | -0.303 | -0.584 |
| BXD05 | -0.314 | -0.258 |
| BXD06 | -0.238 | -1.058 |
| BXD07 | 0.315 | -1.844 |
| BXD08 | -0.153 | -1.162 |
| BXD09 | -0.772 | -0.713 |
| CAST | -0.511 | -0.766 |
| CCcont | -0.688 | -2.602 |
| DS01 | 0.104 | 0.541 |
| DS02 | 0.208 | -0.098 |
| DS04 | 0.233 | 0.649 |
| DS0c | -0.121 | 0.859 |
| GP01 | -1.039 | -1.265 |
| GP02 | -1.521 | -2.155 |
| GP0c | -1.053 | -2.122 |
| NOD | -1.489 | -0.205 |
| NZO | -0.558 | -1.29 |
| PWK | 0.087 | -0.342 |
| H37Rv_KO_CtpC | -0.638 | -1.392 |
| H37Rv_KO_CtpD | -0.775 | -1.364 |
| H37Rv_KO_Rv1272 | -1.009 | -1.256 |
| H37Rv_KO_SugABC | -1.068 | 0.456 |
| H37Rv_KO_MbtN | -0.351 | -1.836 |
| Trans05 | -1.408 | -2.179 |
| macrophage_unactivated | -0.193 | -0.36 |
| IL1 | 0.116 | 0.789 |
| Rapamycin | 0.12 | -1.522 |
| Tcell | -0.13 | -0.635 |
| GMCSF | 0.203 | -0.459 |
| IFNab | -0.06 | -0.112 |
| IFNg | -0.163 | -0.358 |
| IFNg_GMCSF1 | 0.949 | 0.883 |
| Rv1432_day32 | -0.398 | 0.0 |
| Rv1565c_day32 | -0.449 | 2.132 |
| secA2_input | 0.326 | -0.861 |
| delta_Rv3594 | 1.106 | 1.456 |
| delta_Rv3717 | 0.2 | 0.452 |
| delta_Rv3811 | 0.449 | 1.533 |
| delta_Rv0954 | 1.99 | 1.591 |
| PonA1 | 0.38 | 1.08 |
| EccD1_KO | 0.072 | -0.171 |
| EspI_KO | 0.248 | 2.387 |
| PE35_KO | -0.134 | 1.552 |
| PPE68_KO | 0.0 | 0.688 |
| glycerol2 | -0.577 | -2.626 |
| lignocerate | -0.799 | -1.671 |
| oleate | -0.24 | -0.784 |
| phosphatidylcholine | -0.522 | -1.863 |
| acetate | -1.039 | -1.662 |
| glucAc | -1.065 | -2.542 |
| Rv0950ko | -0.829 | 1.517 |
| Rv1096ko | 0.546 | 0.971 |
| Rv3684ko | -0.193 | 1.055 |
| delta_otsA_trehalose | 1.139 | 1.917 |