Top 10 genes with highest correlation to Rv0848/cysK2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1291c/- | (cc=0.6122) | info on Rv1291c/- |
| Rv2831/echA16 | (cc=0.5718) | info on Rv2831/echA16 |
| Rv0006/gyrA | (cc=0.5685) | info on Rv0006/gyrA |
| Rv0139/- | (cc=0.566) | info on Rv0139/- |
| Rv3757c/proW | (cc=0.5643) | info on Rv3757c/proW |
| Rv0377/- | (cc=0.5584) | info on Rv0377/- |
| Rv1681/moeX | (cc=0.5323) | info on Rv1681/moeX |
| Rv1075c/- | (cc=0.5214) | info on Rv1075c/- |
| Rv2032/acg | (cc=0.5084) | info on Rv2032/acg |
| Rv2013/- | (cc=0.5071) | info on Rv2013/- |
Correlation of Rv0848/cysK2 with Rv1291c/-
Normalized LFCs for Rv0848/cysK2:
(description and provenance of datasets)
| Rv0848/cysK2 | Rv1291c/- | |
| Fe_supp_jason_reseq | 0.221 | -0.587 |
| low_pH_jason_reseq | -0.214 | 0.646 |
| NO_jason_reseq | 1.152 | 2.956 |
| B6_jason_reseq | 1.176 | 2.722 |
| MHCII_jason_reseq | 0.917 | 3.045 |
| Isoniazid02 | 0.469 | -0.265 |
| Rifampicin4 | 0.46 | 0.162 |
| Ethambutol3 | 2.419 | -0.344 |
| Meropenem3 | 0.053 | -0.105 |
| Vancomycin16 | 0.708 | 0.31 |
| Rv2680_day32 | 1.311 | 1.533 |
| H37Rv_KO_MarP | 0.772 | 1.456 |
| hypoxia_3wks | 0.694 | -0.502 |
| hypoxia_6wks | 0.768 | 0.173 |
| glycerol | -0.494 | -0.398 |
| cholesterol | -0.242 | -0.358 |
| AJ | -0.568 | -0.422 |
| Bibs02 | 0.989 | -1.816 |
| Bibs02c | -0.097 | -0.229 |
| BL6 | -0.35 | -2.27 |
| BL6a | -0.462 | -0.762 |
| BXD01 | -0.349 | -1.445 |
| BXD010 | -0.555 | -1.659 |
| BXD011 | -0.958 | -2.209 |
| BXD03 | -0.92 | -2.802 |
| BXD04 | -0.303 | -1.034 |
| BXD05 | -0.314 | -2.275 |
| BXD06 | -0.238 | -1.974 |
| BXD07 | 0.315 | -2.312 |
| BXD08 | -0.153 | -0.294 |
| BXD09 | -0.772 | -2.166 |
| CAST | -0.511 | -0.257 |
| CCcont | -0.688 | -2.402 |
| DS01 | 0.104 | -0.371 |
| DS02 | 0.208 | -1.126 |
| DS04 | 0.233 | 0.849 |
| DS0c | -0.121 | -0.368 |
| GP01 | -1.039 | -3.926 |
| GP02 | -1.521 | -2.833 |
| GP0c | -1.053 | -3.286 |
| NOD | -1.489 | -0.555 |
| NZO | -0.558 | -0.579 |
| PWK | 0.087 | -0.308 |
| H37Rv_KO_CtpC | -0.638 | -2.346 |
| H37Rv_KO_CtpD | -0.775 | -4.119 |
| H37Rv_KO_Rv1272 | -1.009 | 0.093 |
| H37Rv_KO_SugABC | -1.068 | -2.458 |
| H37Rv_KO_MbtN | -0.351 | -2.326 |
| Trans05 | -1.408 | -2.857 |
| macrophage_unactivated | -0.193 | -2.661 |
| IL1 | 0.116 | -2.058 |
| Rapamycin | 0.12 | -1.755 |
| Tcell | -0.13 | -0.205 |
| GMCSF | 0.203 | 0.0 |
| IFNab | -0.06 | -1.246 |
| IFNg | -0.163 | -2.336 |
| IFNg_GMCSF1 | 0.949 | 1.467 |
| Rv1432_day32 | -0.398 | -0.254 |
| Rv1565c_day32 | -0.449 | -0.297 |
| secA2_input | 0.326 | 0.066 |
| delta_Rv3594 | 1.106 | 0.991 |
| delta_Rv3717 | 0.2 | 1.847 |
| delta_Rv3811 | 0.449 | 3.618 |
| delta_Rv0954 | 1.99 | 1.875 |
| PonA1 | 0.38 | 2.223 |
| EccD1_KO | 0.072 | 0.536 |
| EspI_KO | 0.248 | 1.058 |
| PE35_KO | -0.134 | 0.309 |
| PPE68_KO | 0.0 | -0.051 |
| glycerol2 | -0.577 | -0.801 |
| lignocerate | -0.799 | -0.697 |
| oleate | -0.24 | -0.098 |
| phosphatidylcholine | -0.522 | -0.441 |
| acetate | -1.039 | -1.596 |
| glucAc | -1.065 | -0.826 |
| Rv0950ko | -0.829 | 0.7 |
| Rv1096ko | 0.546 | 0.383 |
| Rv3684ko | -0.193 | -0.088 |
| delta_otsA_trehalose | 1.139 | 0.026 |