Top 10 genes with highest correlation to Rv0800/pepC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3004/cfp6 | (cc=0.4928) | info on Rv3004/cfp6 |
| Rv3078/hab | (cc=0.4905) | info on Rv3078/hab |
| Rv2813/- | (cc=0.4813) | info on Rv2813/- |
| Rv1189/sigI | (cc=0.4769) | info on Rv1189/sigI |
| Rv2788/sirR | (cc=0.4744) | info on Rv2788/sirR |
| Rv1657/argR | (cc=0.4718) | info on Rv1657/argR |
| Rv0095c/- | (cc=0.4591) | info on Rv0095c/- |
| Rv1136/- | (cc=0.4591) | info on Rv1136/- |
| Rv0084/hycD | (cc=0.4586) | info on Rv0084/hycD |
| Rv2499c/- | (cc=0.4337) | info on Rv2499c/- |
Correlation of Rv0800/pepC with Rv3004/cfp6
Normalized LFCs for Rv0800/pepC:
(description and provenance of datasets)
| Rv0800/pepC | Rv3004/cfp6 | |
| Fe_supp_jason_reseq | -0.226 | -1.746 |
| low_pH_jason_reseq | -0.647 | -2.802 |
| NO_jason_reseq | -0.278 | -0.215 |
| B6_jason_reseq | -0.668 | 1.311 |
| MHCII_jason_reseq | -0.017 | -0.604 |
| Isoniazid02 | 0.793 | -0.308 |
| Rifampicin4 | -0.054 | 0.23 |
| Ethambutol3 | -0.148 | -0.711 |
| Meropenem3 | -0.198 | -0.624 |
| Vancomycin16 | 0.101 | 0.114 |
| Rv2680_day32 | -1.292 | 0.131 |
| H37Rv_KO_MarP | 0.652 | -0.845 |
| hypoxia_3wks | -0.706 | -0.231 |
| hypoxia_6wks | -0.04 | 0.541 |
| glycerol | 1.044 | 0.471 |
| cholesterol | 0.375 | -0.156 |
| AJ | 0.803 | 0.834 |
| Bibs02 | 0.241 | 1.317 |
| Bibs02c | -0.721 | -0.406 |
| BL6 | -0.537 | -0.49 |
| BL6a | -0.782 | 0.888 |
| BXD01 | -0.111 | 0.352 |
| BXD010 | 0.101 | -0.728 |
| BXD011 | -0.125 | 0.491 |
| BXD03 | -0.3 | 0.085 |
| BXD04 | 0.675 | 0.395 |
| BXD05 | -0.032 | 0.43 |
| BXD06 | 0.0 | -0.418 |
| BXD07 | 0.079 | 0.0 |
| BXD08 | 0.217 | 0.013 |
| BXD09 | 0.033 | 0.938 |
| CAST | 0.105 | 0.991 |
| CCcont | 0.492 | 0.0 |
| DS01 | 0.311 | 1.711 |
| DS02 | -0.611 | 1.418 |
| DS04 | 0.336 | -0.271 |
| DS0c | 0.501 | 1.738 |
| GP01 | -0.637 | -0.309 |
| GP02 | 0.646 | -1.639 |
| GP0c | -0.679 | -1.209 |
| NOD | 0.177 | 0.142 |
| NZO | 0.069 | 2.068 |
| PWK | 1.202 | -0.404 |
| H37Rv_KO_CtpC | -0.407 | -3.53 |
| H37Rv_KO_CtpD | -0.337 | -2.851 |
| H37Rv_KO_Rv1272 | -1.555 | -0.124 |
| H37Rv_KO_SugABC | -0.309 | -2.014 |
| H37Rv_KO_MbtN | 0.208 | -0.417 |
| Trans05 | -1.79 | -0.807 |
| macrophage_unactivated | -0.499 | 0.492 |
| IL1 | 0.311 | 0.039 |
| Rapamycin | -0.258 | 0.813 |
| Tcell | 0.505 | 2.095 |
| GMCSF | 0.312 | 0.29 |
| IFNab | -0.432 | 0.366 |
| IFNg | 0.347 | 2.245 |
| IFNg_GMCSF1 | -0.544 | 0.233 |
| Rv1432_day32 | 0.01 | -1.079 |
| Rv1565c_day32 | 0.196 | -1.229 |
| secA2_input | -0.67 | -3.611 |
| delta_Rv3594 | 0.828 | 1.869 |
| delta_Rv3717 | 0.303 | 0.405 |
| delta_Rv3811 | 1.255 | 1.096 |
| delta_Rv0954 | 0.943 | 1.613 |
| PonA1 | 1.541 | 2.748 |
| EccD1_KO | 1.105 | 3.983 |
| EspI_KO | 1.6 | 4.195 |
| PE35_KO | 1.088 | 3.209 |
| PPE68_KO | 1.251 | 2.003 |
| glycerol2 | 0.245 | 0.834 |
| lignocerate | 0.805 | 0.952 |
| oleate | -0.023 | 0.948 |
| phosphatidylcholine | 0.499 | 0.466 |
| acetate | 1.461 | 0.457 |
| glucAc | 0.304 | 0.415 |
| Rv0950ko | -0.458 | 1.061 |
| Rv1096ko | 0.582 | 2.147 |
| Rv3684ko | -0.35 | 0.567 |
| delta_otsA_trehalose | -0.199 | -0.837 |