Top 10 genes with highest correlation to Rv0794c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1489A/- | (cc=0.5679) | info on Rv1489A/- |
| Rv0278c/PE_PGRS3 | (cc=0.5352) | info on Rv0278c/PE_PGRS3 |
| Rv2119/- | (cc=0.5329) | info on Rv2119/- |
| Rv0567/- | (cc=0.5311) | info on Rv0567/- |
| Rv0089/- | (cc=0.5302) | info on Rv0089/- |
| Rv0136/cyp138 | (cc=0.5213) | info on Rv0136/cyp138 |
| Rv0564c/gpdA1 | (cc=0.5189) | info on Rv0564c/gpdA1 |
| Rv0789c/- | (cc=0.4972) | info on Rv0789c/- |
| Rv2019/- | (cc=0.4869) | info on Rv2019/- |
| Rv2424c/- | (cc=0.4826) | info on Rv2424c/- |
Correlation of Rv0794c/- with Rv0564c/gpdA1
Normalized LFCs for Rv0794c/-:
(description and provenance of datasets)
| Rv0794c/- | Rv0564c/gpdA1 | |
| Fe_supp_jason_reseq | -0.082 | 0.354 |
| low_pH_jason_reseq | -1.35 | -0.32 |
| NO_jason_reseq | -0.184 | 0.047 |
| B6_jason_reseq | 1.001 | 0.298 |
| MHCII_jason_reseq | 1.09 | 0.278 |
| Isoniazid02 | -0.272 | -0.22 |
| Rifampicin4 | -0.384 | -0.387 |
| Ethambutol3 | -0.323 | -0.04 |
| Meropenem3 | -0.783 | 0.127 |
| Vancomycin16 | -0.146 | 0.05 |
| Rv2680_day32 | 0.581 | 0.43 |
| H37Rv_KO_MarP | 0.025 | 0.44 |
| hypoxia_3wks | 0.881 | -0.905 |
| hypoxia_6wks | 0.942 | -0.171 |
| glycerol | -0.183 | -0.767 |
| cholesterol | -0.194 | 0.094 |
| AJ | 0.124 | -0.334 |
| Bibs02 | -0.683 | -1.221 |
| Bibs02c | -0.243 | -0.28 |
| BL6 | -0.482 | 0.236 |
| BL6a | -0.375 | -0.94 |
| BXD01 | -0.429 | 0.17 |
| BXD010 | 0.087 | -0.625 |
| BXD011 | -0.42 | -0.906 |
| BXD03 | 0.198 | -1.871 |
| BXD04 | 0.147 | 0.3 |
| BXD05 | -0.043 | -1.353 |
| BXD06 | 0.102 | -0.431 |
| BXD07 | -0.486 | -0.8 |
| BXD08 | 0.091 | -0.212 |
| BXD09 | -0.347 | -0.77 |
| CAST | 0.225 | -0.309 |
| CCcont | -0.147 | -0.269 |
| DS01 | -0.513 | -0.749 |
| DS02 | 1.027 | -0.131 |
| DS04 | 0.015 | 0.052 |
| DS0c | 0.148 | 0.028 |
| GP01 | -0.605 | 0.375 |
| GP02 | 0.769 | -0.038 |
| GP0c | 0.021 | 0.431 |
| NOD | 0.052 | -0.478 |
| NZO | 0.584 | -0.436 |
| PWK | 0.34 | -0.324 |
| H37Rv_KO_CtpC | -0.644 | -0.457 |
| H37Rv_KO_CtpD | -1.377 | -0.163 |
| H37Rv_KO_Rv1272 | 0.353 | -1.147 |
| H37Rv_KO_SugABC | -0.048 | -0.581 |
| H37Rv_KO_MbtN | -0.951 | -1.595 |
| Trans05 | 0.543 | -0.208 |
| macrophage_unactivated | -0.47 | 0.234 |
| IL1 | -1.032 | -0.039 |
| Rapamycin | -0.414 | 0.0 |
| Tcell | 1.049 | 0.544 |
| GMCSF | -1.006 | -1.117 |
| IFNab | -1.578 | -1.179 |
| IFNg | -0.93 | -1.131 |
| IFNg_GMCSF1 | -0.993 | -0.732 |
| Rv1432_day32 | 0.233 | -0.527 |
| Rv1565c_day32 | 1.005 | -0.466 |
| secA2_input | 0.373 | -0.058 |
| delta_Rv3594 | -0.54 | -0.483 |
| delta_Rv3717 | -0.337 | -0.607 |
| delta_Rv3811 | -0.424 | -0.329 |
| delta_Rv0954 | -0.548 | -0.447 |
| PonA1 | -0.2 | 0.0 |
| EccD1_KO | 0.724 | 0.806 |
| EspI_KO | 1.041 | 0.322 |
| PE35_KO | 1.283 | 1.117 |
| PPE68_KO | 0.755 | 0.314 |
| glycerol2 | 1.288 | 0.989 |
| lignocerate | 1.604 | 1.299 |
| oleate | 0.0 | 0.064 |
| phosphatidylcholine | 1.345 | 1.015 |
| acetate | 1.596 | 1.127 |
| glucAc | 1.213 | 1.072 |
| Rv0950ko | -1.122 | 0.546 |
| Rv1096ko | 0.727 | 1.264 |
| Rv3684ko | -0.452 | -0.226 |
| delta_otsA_trehalose | -0.88 | 0.285 |