Top 10 genes with highest correlation to Rv0785/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3364c/- | (cc=0.5439) | info on Rv3364c/- |
| Rv3189/- | (cc=0.485) | info on Rv3189/- |
| Rv0113/gmhA | (cc=0.4771) | info on Rv0113/gmhA |
| Rv0233/nrdB | (cc=0.468) | info on Rv0233/nrdB |
| Rv3554/fdxB | (cc=0.4508) | info on Rv3554/fdxB |
| Rv0592/mce2D | (cc=0.435) | info on Rv0592/mce2D |
| Rv3770c/- | (cc=0.4317) | info on Rv3770c/- |
| Rv3637/- | (cc=0.4306) | info on Rv3637/- |
| Rv2432c/- | (cc=0.4242) | info on Rv2432c/- |
| Rv1736c/narX | (cc=0.4237) | info on Rv1736c/narX |
Correlation of Rv0785/- with Rv0113/gmhA
Normalized LFCs for Rv0785/-:
(description and provenance of datasets)
| Rv0785/- | Rv0113/gmhA | |
| Fe_supp_jason_reseq | 0.758 | 2.595 |
| low_pH_jason_reseq | -0.328 | -0.831 |
| NO_jason_reseq | -0.701 | -1.536 |
| B6_jason_reseq | 0.892 | 3.067 |
| MHCII_jason_reseq | 1.296 | 2.446 |
| Isoniazid02 | 0.067 | 1.801 |
| Rifampicin4 | 0.325 | 0.1 |
| Ethambutol3 | -0.382 | 0.327 |
| Meropenem3 | -0.71 | -0.341 |
| Vancomycin16 | 0.202 | -0.098 |
| Rv2680_day32 | -0.206 | 0.0 |
| H37Rv_KO_MarP | 0.0 | 0.754 |
| hypoxia_3wks | -0.056 | -0.415 |
| hypoxia_6wks | -0.029 | -0.708 |
| glycerol | -0.471 | 0.398 |
| cholesterol | 0.286 | -0.353 |
| AJ | -0.129 | 0.874 |
| Bibs02 | 1.029 | 2.099 |
| Bibs02c | 0.694 | 2.536 |
| BL6 | -0.426 | -0.982 |
| BL6a | 0.0 | 1.936 |
| BXD01 | -0.098 | -0.079 |
| BXD010 | -0.012 | 0.273 |
| BXD011 | 0.456 | 0.097 |
| BXD03 | 0.404 | -1.526 |
| BXD04 | -0.288 | -0.5 |
| BXD05 | -0.254 | -2.089 |
| BXD06 | 0.203 | 0.051 |
| BXD07 | 0.012 | 0.227 |
| BXD08 | 0.047 | -0.053 |
| BXD09 | 0.038 | -0.886 |
| CAST | 0.656 | 1.552 |
| CCcont | -0.528 | -0.255 |
| DS01 | 1.239 | 2.712 |
| DS02 | 1.303 | 2.039 |
| DS04 | 1.677 | 2.791 |
| DS0c | 1.266 | 2.918 |
| GP01 | -0.388 | -1.236 |
| GP02 | 0.486 | 0.899 |
| GP0c | -0.599 | 0.416 |
| NOD | 0.428 | 1.671 |
| NZO | 0.191 | -0.207 |
| PWK | 0.702 | 0.6 |
| H37Rv_KO_CtpC | -0.748 | -0.065 |
| H37Rv_KO_CtpD | -0.133 | 1.187 |
| H37Rv_KO_Rv1272 | -0.796 | -0.415 |
| H37Rv_KO_SugABC | -1.292 | 1.38 |
| H37Rv_KO_MbtN | 0.518 | 1.197 |
| Trans05 | -0.866 | -0.689 |
| macrophage_unactivated | 0.306 | 0.12 |
| IL1 | 0.718 | -0.489 |
| Rapamycin | 0.509 | -1.396 |
| Tcell | 0.541 | -0.261 |
| GMCSF | 0.098 | 0.573 |
| IFNab | 0.148 | -0.916 |
| IFNg | 0.382 | -0.559 |
| IFNg_GMCSF1 | 0.726 | 0.682 |
| Rv1432_day32 | 0.89 | 2.356 |
| Rv1565c_day32 | 0.381 | -0.415 |
| secA2_input | 0.157 | -0.188 |
| delta_Rv3594 | 0.948 | 3.223 |
| delta_Rv3717 | 0.78 | 1.258 |
| delta_Rv3811 | 0.631 | 0.813 |
| delta_Rv0954 | 0.293 | 1.95 |
| PonA1 | -0.127 | 2.546 |
| EccD1_KO | 0.069 | -1.5 |
| EspI_KO | 0.451 | -2.524 |
| PE35_KO | 0.236 | -1.097 |
| PPE68_KO | -0.205 | -1.328 |
| glycerol2 | -0.223 | 0.311 |
| lignocerate | -0.256 | 0.868 |
| oleate | -0.373 | 0.588 |
| phosphatidylcholine | -0.108 | 0.496 |
| acetate | -0.407 | 0.836 |
| glucAc | -0.389 | 0.971 |
| Rv0950ko | -0.419 | 1.423 |
| Rv1096ko | 0.486 | -0.142 |
| Rv3684ko | -0.321 | 0.151 |
| delta_otsA_trehalose | 1.004 | 0.305 |