Top 10 genes with highest correlation to Rv0754/PE_PGRS11:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3059/cyp136 | (cc=0.5991) | info on Rv3059/cyp136 |
| Rv1995/- | (cc=0.5726) | info on Rv1995/- |
| Rv1834/lipZ | (cc=0.5507) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.55) | info on Rv0136/cyp138 |
| Rv2306A/- | (cc=0.5358) | info on Rv2306A/- |
| Rv3058c/- | (cc=0.5324) | info on Rv3058c/- |
| Rv2636/- | (cc=0.5287) | info on Rv2636/- |
| Rv3447c/eccC4 | (cc=0.5232) | info on Rv3447c/eccC4 |
| Rv1057/- | (cc=0.5169) | info on Rv1057/- |
| Rv1894c/- | (cc=0.5137) | info on Rv1894c/- |
Correlation of Rv0754/PE_PGRS11 with Rv3059/cyp136
Normalized LFCs for Rv0754/PE_PGRS11:
(description and provenance of datasets)
| Rv0754/PE_PGRS11 | Rv3059/cyp136 | |
| Fe_supp_jason_reseq | -0.499 | -0.786 |
| low_pH_jason_reseq | -0.475 | -1.248 |
| NO_jason_reseq | 0.068 | -0.438 |
| B6_jason_reseq | 0.63 | -0.289 |
| MHCII_jason_reseq | -0.045 | 0.252 |
| Isoniazid02 | -0.874 | -0.421 |
| Rifampicin4 | -0.43 | -0.766 |
| Ethambutol3 | -0.28 | 0.223 |
| Meropenem3 | -0.551 | -0.298 |
| Vancomycin16 | -0.822 | -0.371 |
| Rv2680_day32 | -0.473 | 0.114 |
| H37Rv_KO_MarP | 0.509 | 0.683 |
| hypoxia_3wks | 0.0 | -0.674 |
| hypoxia_6wks | 0.194 | -0.303 |
| glycerol | 0.758 | -0.919 |
| cholesterol | -0.019 | -1.049 |
| AJ | 0.03 | -0.215 |
| Bibs02 | 0.229 | -1.007 |
| Bibs02c | -0.13 | -0.929 |
| BL6 | -0.248 | -1.607 |
| BL6a | -0.413 | -1.482 |
| BXD01 | -0.299 | -1.374 |
| BXD010 | -0.797 | -1.409 |
| BXD011 | -0.314 | -1.538 |
| BXD03 | -0.663 | -1.053 |
| BXD04 | -0.548 | -0.991 |
| BXD05 | -0.717 | -1.387 |
| BXD06 | -0.197 | -1.515 |
| BXD07 | -0.747 | -1.927 |
| BXD08 | -0.372 | -1.873 |
| BXD09 | -0.769 | -1.449 |
| CAST | 0.19 | -0.038 |
| CCcont | -0.613 | -1.415 |
| DS01 | 0.06 | -0.986 |
| DS02 | 0.019 | -0.813 |
| DS04 | 0.545 | -1.054 |
| DS0c | -0.407 | -0.691 |
| GP01 | -0.098 | -0.195 |
| GP02 | 0.579 | -0.71 |
| GP0c | -0.673 | -1.204 |
| NOD | 0.085 | 0.708 |
| NZO | 0.481 | -0.056 |
| PWK | 0.115 | 0.107 |
| H37Rv_KO_CtpC | -0.064 | -0.899 |
| H37Rv_KO_CtpD | -0.488 | -1.081 |
| H37Rv_KO_Rv1272 | -0.043 | -1.077 |
| H37Rv_KO_SugABC | -0.413 | -0.55 |
| H37Rv_KO_MbtN | -0.276 | -1.428 |
| Trans05 | -0.314 | -0.998 |
| macrophage_unactivated | 0.259 | -0.789 |
| IL1 | 0.0 | -0.934 |
| Rapamycin | -0.267 | -1.381 |
| Tcell | 0.055 | -0.779 |
| GMCSF | -0.277 | -1.03 |
| IFNab | -0.103 | -1.379 |
| IFNg | -0.69 | -1.371 |
| IFNg_GMCSF1 | -0.163 | -0.767 |
| Rv1432_day32 | 0.566 | -0.991 |
| Rv1565c_day32 | 0.681 | 0.009 |
| secA2_input | 0.557 | -0.052 |
| delta_Rv3594 | -0.04 | 0.266 |
| delta_Rv3717 | -0.21 | -0.184 |
| delta_Rv3811 | 0.138 | 0.152 |
| delta_Rv0954 | 0.012 | 0.322 |
| PonA1 | 0.261 | 0.759 |
| EccD1_KO | 0.48 | -0.132 |
| EspI_KO | 0.0 | 0.14 |
| PE35_KO | 0.128 | 0.414 |
| PPE68_KO | 0.307 | 0.202 |
| glycerol2 | 0.972 | 2.535 |
| lignocerate | 0.704 | 1.141 |
| oleate | 0.992 | 0.213 |
| phosphatidylcholine | 1.007 | 2.475 |
| acetate | 0.066 | -0.497 |
| glucAc | 0.081 | -0.382 |
| Rv0950ko | -0.576 | -0.311 |
| Rv1096ko | -0.066 | -0.51 |
| Rv3684ko | -0.678 | -0.851 |
| delta_otsA_trehalose | 1.322 | 0.225 |