Top 10 genes with highest correlation to Rv0732/secY:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2966c/- | (cc=0.5801) | info on Rv2966c/- |
| Rv1421/- | (cc=0.572) | info on Rv1421/- |
| Rv2131c/cysQ | (cc=0.562) | info on Rv2131c/cysQ |
| Rv1821/secA2 | (cc=0.5616) | info on Rv1821/secA2 |
| Rv0153c/ptbB | (cc=0.54) | info on Rv0153c/ptbB |
| Rv2134c/- | (cc=0.5387) | info on Rv2134c/- |
| Rv1420/uvrC | (cc=0.5344) | info on Rv1420/uvrC |
| Rv3269/- | (cc=0.5331) | info on Rv3269/- |
| Rv1298/rpmE | (cc=0.533) | info on Rv1298/rpmE |
| Rv0998/- | (cc=0.529) | info on Rv0998/- |
Correlation of Rv0732/secY with Rv2131c/cysQ
Normalized LFCs for Rv0732/secY:
(description and provenance of datasets)
| Rv0732/secY | Rv2131c/cysQ | |
| Fe_supp_jason_reseq | 0.218 | -1.579 |
| low_pH_jason_reseq | 0.0 | 2.441 |
| NO_jason_reseq | 0.0 | -2.042 |
| B6_jason_reseq | 0.0 | -1.402 |
| MHCII_jason_reseq | 0.135 | -0.977 |
| Isoniazid02 | 0.668 | 4.744 |
| Rifampicin4 | -0.523 | 0.29 |
| Ethambutol3 | -0.824 | 0.777 |
| Meropenem3 | -0.812 | -0.497 |
| Vancomycin16 | -0.796 | -1.303 |
| Rv2680_day32 | -0.131 | 0.0 |
| H37Rv_KO_MarP | -0.825 | 1.3 |
| hypoxia_3wks | -0.399 | 1.184 |
| hypoxia_6wks | 0.712 | 2.414 |
| glycerol | 0.992 | 0.0 |
| cholesterol | 0.614 | 0.0 |
| AJ | 0.0 | 0.0 |
| Bibs02 | 0.0 | 0.0 |
| Bibs02c | 0.0 | 0.0 |
| BL6 | 1.907 | 2.634 |
| BL6a | 0.198 | 2.709 |
| BXD01 | 0.458 | 3.093 |
| BXD010 | 0.0 | 2.525 |
| BXD011 | 0.127 | 2.032 |
| BXD03 | 0.0 | 0.75 |
| BXD04 | 1.184 | 1.582 |
| BXD05 | 0.0 | 2.051 |
| BXD06 | 0.0 | 2.793 |
| BXD07 | 0.138 | 3.258 |
| BXD08 | 0.0 | 1.781 |
| BXD09 | 0.268 | 3.789 |
| CAST | 0.0 | 0.0 |
| CCcont | 0.525 | 4.141 |
| DS01 | 0.0 | 0.0 |
| DS02 | 0.0 | 0.0 |
| DS04 | 0.37 | 2.358 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.0 | 0.0 |
| GP02 | 0.0 | 0.159 |
| GP0c | 0.357 | 0.0 |
| NOD | 0.0 | 0.0 |
| NZO | 0.0 | 0.0 |
| PWK | 0.0 | 0.0 |
| H37Rv_KO_CtpC | 0.0 | 0.901 |
| H37Rv_KO_CtpD | 0.0 | 0.241 |
| H37Rv_KO_Rv1272 | 0.0 | 1.714 |
| H37Rv_KO_SugABC | 0.189 | 2.572 |
| H37Rv_KO_MbtN | 1.912 | 1.712 |
| Trans05 | 0.0 | 1.251 |
| macrophage_unactivated | 0.363 | -1.146 |
| IL1 | -0.78 | -2.515 |
| Rapamycin | 0.0 | -1.439 |
| Tcell | 0.375 | -3.812 |
| GMCSF | -0.333 | -1.545 |
| IFNab | 0.348 | 2.576 |
| IFNg | 0.0 | -2.673 |
| IFNg_GMCSF1 | -0.396 | -1.838 |
| Rv1432_day32 | 0.439 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -0.146 | 0.523 |
| delta_Rv3594 | 2.362 | 4.569 |
| delta_Rv3717 | 1.1 | 3.925 |
| delta_Rv3811 | 1.658 | 4.714 |
| delta_Rv0954 | 0.287 | -0.69 |
| PonA1 | 0.0 | -1.32 |
| EccD1_KO | -0.559 | -5.903 |
| EspI_KO | -0.75 | -6.0 |
| PE35_KO | -0.496 | -3.063 |
| PPE68_KO | 0.25 | -4.348 |
| glycerol2 | -1.595 | -0.744 |
| lignocerate | -1.386 | -1.218 |
| oleate | -1.239 | -1.955 |
| phosphatidylcholine | -1.594 | -1.931 |
| acetate | -0.352 | 0.422 |
| glucAc | -0.903 | -0.249 |
| Rv0950ko | -0.458 | -5.992 |
| Rv1096ko | -1.252 | -6.0 |
| Rv3684ko | -1.359 | -6.0 |
| delta_otsA_trehalose | -2.382 | -1.39 |