Top 10 genes with highest correlation to Rv0679c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0540/- | (cc=0.5492) | info on Rv0540/- |
| Rv1041c/- | (cc=0.5167) | info on Rv1041c/- |
| Rv2484c/- | (cc=0.4904) | info on Rv2484c/- |
| Rv3062/ligB | (cc=0.4879) | info on Rv3062/ligB |
| Rv1453/- | (cc=0.4875) | info on Rv1453/- |
| Rv0082/- | (cc=0.4814) | info on Rv0082/- |
| Rv2081c/- | (cc=0.4724) | info on Rv2081c/- |
| Rv1046c/- | (cc=0.4724) | info on Rv1046c/- |
| Rv2232/ptkA | (cc=0.47) | info on Rv2232/ptkA |
| Rv0747/PE_PGRS10 | (cc=0.4641) | info on Rv0747/PE_PGRS10 |
Correlation of Rv0679c/- with Rv3062/ligB
Normalized LFCs for Rv0679c/-:
(description and provenance of datasets)
| Rv0679c/- | Rv3062/ligB | |
| Fe_supp_jason_reseq | -0.134 | -0.802 |
| low_pH_jason_reseq | -0.524 | 0.564 |
| NO_jason_reseq | 0.21 | 0.095 |
| B6_jason_reseq | 0.755 | 0.82 |
| MHCII_jason_reseq | 0.913 | 0.271 |
| Isoniazid02 | 0.035 | 0.335 |
| Rifampicin4 | 0.127 | 0.742 |
| Ethambutol3 | 0.631 | 1.569 |
| Meropenem3 | 0.54 | 0.392 |
| Vancomycin16 | 0.0 | 0.783 |
| Rv2680_day32 | 0.175 | 0.986 |
| H37Rv_KO_MarP | -0.25 | 0.899 |
| hypoxia_3wks | 0.782 | 0.415 |
| hypoxia_6wks | 0.015 | 0.455 |
| glycerol | -1.498 | 0.246 |
| cholesterol | 0.136 | -0.068 |
| AJ | 0.802 | -0.624 |
| Bibs02 | 0.67 | 0.046 |
| Bibs02c | 0.485 | -0.203 |
| BL6 | -1.117 | -1.337 |
| BL6a | 0.237 | -1.158 |
| BXD01 | 0.101 | -0.209 |
| BXD010 | -1.5 | -1.165 |
| BXD011 | -1.104 | -1.362 |
| BXD03 | -2.282 | -1.281 |
| BXD04 | -0.643 | 0.025 |
| BXD05 | -0.088 | -1.01 |
| BXD06 | -1.054 | -0.855 |
| BXD07 | -0.311 | -0.372 |
| BXD08 | 0.18 | -1.277 |
| BXD09 | -0.498 | -1.115 |
| CAST | -0.237 | -0.499 |
| CCcont | -1.83 | -1.287 |
| DS01 | -0.098 | -0.087 |
| DS02 | -0.411 | 0.473 |
| DS04 | -1.244 | -0.561 |
| DS0c | -1.171 | 0.57 |
| GP01 | -2.641 | -1.757 |
| GP02 | -1.271 | -0.99 |
| GP0c | -1.721 | -1.506 |
| NOD | -1.323 | -0.348 |
| NZO | 0.614 | -0.309 |
| PWK | 0.352 | -0.328 |
| H37Rv_KO_CtpC | 0.332 | -0.965 |
| H37Rv_KO_CtpD | -0.511 | -1.829 |
| H37Rv_KO_Rv1272 | -1.603 | -1.898 |
| H37Rv_KO_SugABC | 0.547 | -0.266 |
| H37Rv_KO_MbtN | -0.814 | -1.194 |
| Trans05 | -0.284 | -0.478 |
| macrophage_unactivated | -1.203 | -0.436 |
| IL1 | -2.361 | -0.148 |
| Rapamycin | -1.455 | -0.479 |
| Tcell | -0.645 | 0.261 |
| GMCSF | -1.085 | -1.154 |
| IFNab | -2.851 | -1.388 |
| IFNg | -0.746 | -1.35 |
| IFNg_GMCSF1 | -1.103 | 0.201 |
| Rv1432_day32 | 0.343 | 1.035 |
| Rv1565c_day32 | 0.0 | 0.589 |
| secA2_input | 0.059 | -0.279 |
| delta_Rv3594 | -0.829 | 0.078 |
| delta_Rv3717 | -1.107 | -0.17 |
| delta_Rv3811 | -1.257 | -1.071 |
| delta_Rv0954 | -2.14 | -0.034 |
| PonA1 | -2.053 | -0.205 |
| EccD1_KO | 0.684 | 1.072 |
| EspI_KO | -1.075 | -0.268 |
| PE35_KO | -0.117 | -0.108 |
| PPE68_KO | -0.355 | 0.173 |
| glycerol2 | 0.053 | 0.231 |
| lignocerate | -1.003 | 0.309 |
| oleate | 0.7 | 0.432 |
| phosphatidylcholine | 0.136 | 0.473 |
| acetate | -1.234 | -0.253 |
| glucAc | -3.343 | -0.193 |
| Rv0950ko | -0.036 | 1.288 |
| Rv1096ko | 0.428 | 1.927 |
| Rv3684ko | 0.314 | 1.569 |
| delta_otsA_trehalose | 0.481 | -0.11 |