Top 10 genes with highest correlation to Rv0614/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2490c/PE_PGRS43 | (cc=0.656) | info on Rv2490c/PE_PGRS43 |
| Rv0648/- | (cc=0.625) | info on Rv0648/- |
| Rv0359/- | (cc=0.6218) | info on Rv0359/- |
| Rv0613c/- | (cc=0.6192) | info on Rv0613c/- |
| Rv2340c/PE_PGRS39 | (cc=0.6185) | info on Rv2340c/PE_PGRS39 |
| Rv3354/- | (cc=0.6086) | info on Rv3354/- |
| Rv0850/- | (cc=0.6067) | info on Rv0850/- |
| Rv1632c/- | (cc=0.5968) | info on Rv1632c/- |
| Rv2669/- | (cc=0.5939) | info on Rv2669/- |
| Rv1192/- | (cc=0.5869) | info on Rv1192/- |
Correlation of Rv0614/- with Rv2490c/PE_PGRS43
Normalized LFCs for Rv0614/-:
(description and provenance of datasets)
| Rv0614/- | Rv2490c/PE_PGRS43 | |
| Fe_supp_jason_reseq | -0.439 | -0.684 |
| low_pH_jason_reseq | 0.074 | -0.584 |
| NO_jason_reseq | -0.244 | -0.084 |
| B6_jason_reseq | 1.609 | 0.242 |
| MHCII_jason_reseq | 0.986 | 1.054 |
| Isoniazid02 | 1.017 | 0.659 |
| Rifampicin4 | 0.452 | 0.439 |
| Ethambutol3 | 0.675 | 0.323 |
| Meropenem3 | -0.138 | 0.284 |
| Vancomycin16 | 0.443 | 0.22 |
| Rv2680_day32 | 0.086 | -0.203 |
| H37Rv_KO_MarP | 0.413 | 0.154 |
| hypoxia_3wks | -0.195 | -0.267 |
| hypoxia_6wks | -0.117 | -0.576 |
| glycerol | 0.717 | 1.437 |
| cholesterol | 0.351 | 0.837 |
| AJ | 0.024 | 0.489 |
| Bibs02 | -0.065 | 0.657 |
| Bibs02c | 0.12 | 0.327 |
| BL6 | -0.339 | -0.498 |
| BL6a | -0.375 | -0.319 |
| BXD01 | -0.766 | -0.435 |
| BXD010 | -1.292 | -0.72 |
| BXD011 | -1.251 | -0.716 |
| BXD03 | -1.159 | -0.513 |
| BXD04 | -0.735 | -0.369 |
| BXD05 | -0.993 | -0.248 |
| BXD06 | -0.661 | -0.75 |
| BXD07 | -0.781 | -0.794 |
| BXD08 | -0.727 | -0.648 |
| BXD09 | -1.215 | -0.729 |
| CAST | -0.37 | 0.255 |
| CCcont | -0.605 | -1.368 |
| DS01 | 0.65 | 0.205 |
| DS02 | 0.701 | -0.014 |
| DS04 | 0.88 | 0.679 |
| DS0c | 0.721 | -0.16 |
| GP01 | -0.563 | 0.013 |
| GP02 | 0.861 | 0.675 |
| GP0c | -0.147 | -0.2 |
| NOD | -0.521 | -0.329 |
| NZO | -0.143 | 0.051 |
| PWK | 0.561 | -0.065 |
| H37Rv_KO_CtpC | -0.851 | -0.95 |
| H37Rv_KO_CtpD | -0.935 | 0.314 |
| H37Rv_KO_Rv1272 | 0.039 | -0.471 |
| H37Rv_KO_SugABC | -0.731 | -0.19 |
| H37Rv_KO_MbtN | -0.594 | -0.027 |
| Trans05 | -1.456 | -0.133 |
| macrophage_unactivated | -1.083 | -1.092 |
| IL1 | -0.688 | -1.026 |
| Rapamycin | -0.737 | -0.301 |
| Tcell | -0.883 | -1.225 |
| GMCSF | -0.417 | 0.092 |
| IFNab | -0.819 | -1.23 |
| IFNg | -0.069 | -1.048 |
| IFNg_GMCSF1 | -0.754 | -0.189 |
| Rv1432_day32 | -0.591 | 0.025 |
| Rv1565c_day32 | -0.488 | 0.021 |
| secA2_input | -0.344 | 0.166 |
| delta_Rv3594 | 0.451 | 0.199 |
| delta_Rv3717 | -0.522 | 0.118 |
| delta_Rv3811 | 0.555 | -0.294 |
| delta_Rv0954 | 0.371 | -0.329 |
| PonA1 | -0.118 | -0.216 |
| EccD1_KO | 0.595 | 0.342 |
| EspI_KO | 0.405 | 0.026 |
| PE35_KO | -0.359 | 0.204 |
| PPE68_KO | -0.394 | 0.198 |
| glycerol2 | 0.399 | 0.07 |
| lignocerate | 0.475 | -0.129 |
| oleate | 0.244 | 0.373 |
| phosphatidylcholine | 0.658 | 0.308 |
| acetate | 0.135 | 0.216 |
| glucAc | 0.131 | 0.101 |
| Rv0950ko | 0.115 | 0.88 |
| Rv1096ko | 0.878 | 0.392 |
| Rv3684ko | -0.128 | 0.488 |
| delta_otsA_trehalose | -2.525 | -1.402 |